prot_Ecto-sp8_S_contig9538.31149.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9538.31149.1
Unique Nameprot_Ecto-sp8_S_contig9538.31149.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length78
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9538.31149.1 vs. uniprot
Match: D7G7I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I5_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 5.490e-36
Identity = 73/77 (94.81%), Postives = 74/77 (96.10%), Query Frame = 0 
Query:    1 MSVVAGAVGGGLVVGAIATLILLFKTGRLKHCRNGSSRGTSPGVGPMPAAAGPSAMESARRGMQIPAAIQYPEALRA 77
            MSVVA AVGGGLVVGAIATLILLFKTGRLKHCRNGSS GTS GVGP+PAAAGPSAMESARRGMQIPAAIQYPEALRA
Sbjct:  266 MSVVAVAVGGGLVVGAIATLILLFKTGRLKHCRNGSSHGTSRGVGPIPAAAGPSAMESARRGMQIPAAIQYPEALRA 342
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BLAST of mRNA_Ecto-sp8_S_contig9538.31149.1 vs. uniprot
Match: A0A6H5K4G7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G7_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 8.800e-31
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 0 
Query:    6 GAVGGGLVVGAIATLILLFKTGRLKHCRNGSSRGTSPGVGPMPAAAGPSAMESARRGMQIPAAIQYPEALRA 77
            G  GGGLVVGAIA LILLFKTGRLKHCRNG+S G SPGVG +PAAAGPSAMESARRGMQ+PAAIQYPEALRA
Sbjct:  295 GGFGGGLVVGAIAILILLFKTGRLKHCRNGNSHGPSPGVGQIPAAAGPSAMESARRGMQLPAAIQYPEALRA 366
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9538.31149.1 vs. uniprot
Match: D7FXV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV8_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.070e-20
Identity = 55/76 (72.37%), Postives = 61/76 (80.26%), Query Frame = 0 
Query:    1 MSVVAGAVGGGLVVGAIATLILLFKTGRLKHCRNGSSRGTSPGVGPMPAAAGPSAMESARRGMQIPAAIQYPEALR 76
            MSVVAGAVGGGLVVGAIA ++LLFKTGRLK C N +S   SPGVG +PA A PSA  SA  G Q+PAA+QYPEALR
Sbjct:  360 MSVVAGAVGGGLVVGAIAAVVLLFKTGRLKPCGNDNSSEPSPGVGSIPAGA-PSATSSAIAGTQLPAAMQYPEALR 434
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9538.31149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7I5_ECTSI5.490e-3694.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4G7_9PHAE8.800e-3187.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXV8_ECTSI1.070e-2072.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..77
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9538contigEcto-sp8_S_contig9538:6167..6400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9538.31149.1mRNA_Ecto-sp8_S_contig9538.31149.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9538 6097..7047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9538.31149.1 ID=prot_Ecto-sp8_S_contig9538.31149.1|Name=mRNA_Ecto-sp8_S_contig9538.31149.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=78bp
MSVVAGAVGGGLVVGAIATLILLFKTGRLKHCRNGSSRGTSPGVGPMPAA
AGPSAMESARRGMQIPAAIQYPEALRA*
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