prot_Ecto-sp8_S_contig9535.31144.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig9535.31144.1
Unique Name	prot_Ecto-sp8_S_contig9535.31144.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	375

Homology

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: D7FHZ0_ECTSI (Phosphorylated adapter RNA export protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ0_ECTSI)

HSP 1 Score: 631 bits (1628), Expect = 9.900e-227
Identity = 362/374 (96.79%), Postives = 364/374 (97.33%), Query Frame = 0

Query:    1 MSTFDDDDMDFGGDDDGDDFLTGKLAALGIDEDLELSGGEEEDDNPAPATDPAADSSNKPPGVVAPSPQQASASTAVAAVPAASRSTAPAPADDWGAPPSEGCSSGDAGIWGEVDSXXXTRKATPTAEAPPAAGGGRGTAVLEDGELVQMIDQPLRASRGREQRSARDSGRGGGXXXXXXXXRGKRGRPKNDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEPARLKELYADELRVKKEKDRARRAANKRKAEAALAGEDVMTPRNPPRNRXXXXXXXXXATRAGRDMGKWAGPTAGAGGRDGCGDAVAAKRARAGISSLSKE 374
            MSTFDDDDMDFGGDDDGDDFLTGKLAALGIDEDLELSGGEEEDDN APATDPAADSSNKPPG+VAPSPQQASASTAVAAVPAASRSTAPAPADDWGAPPSEGCS GDAGIWGEVDS   TR ATPT EAPPAAGGGRGTAV EDGELVQMIDQPLR SRGREQRSARDSGRGGGXXXXXXXXRGKRGRPK DGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEP+RLKELYADELRVKKEKDRARRAANKRKAEAALAGEDVMTPRNPPRNRXXXXXXXXXATRAGRDMGKWAGPTAGAGGRDGCGDAVAAKRARAGISSLSKE
Sbjct:    1 MSTFDDDDMDFGGDDDGDDFLTGKLAALGIDEDLELSGGEEEDDNRAPATDPAADSSNKPPGIVAPSPQQASASTAVAAVPAASRSTAPAPADDWGAPPSEGCSPGDAGIWGEVDSWGETRIATPTVEAPPAAGGGRGTAV-EDGELVQMIDQPLRTSRGREQRSARDSGRGGGXXXXXXXXRGKRGRPKKDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEPSRLKELYADELRVKKEKDRARRAANKRKAEAALAGEDVMTPRNPPRNRXXXXXXXXXATRAGRDMGKWAGPTAGAGGRDGCGDAVAAKRARAGISSLSKE 373

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: A0A835ZKK4_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKK4_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.780e-20
Identity = 51/112 (45.54%), Postives = 75/112 (66.96%), Query Frame = 0

Query:  189 PKNDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEPARLKELYADELRVKKEKDRARRAANK 300
            P+N  +   +  T+K+ A  +CE+L EPKYYLMCQVV  +G+NKT  LL+   + +  GG+ TADG R+R+ GGVF TLL+  + P ++K +YA++ RV+K + R  RA  K
Sbjct:  153 PRNKRRKPQQRWTVKDAAIRLCEQLDEPKYYLMCQVVWHLGFNKTNRLLKQTVQIERDGGLRTADGKRRRSPGGVFLTLLRDAVTPEKMKAIYAEDKRVQKLRARTVRAMRK 264

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: A0A8J2X059_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X059_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 7.950e-11
Identity = 48/121 (39.67%), Postives = 61/121 (50.41%), Query Frame = 0

Query:  193 GKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEPARLKELY-ADELRVKKEKDRARRAANKRKAEAALAGEDV 312
            G  RG     +  A+     L E    L+ + +  IG    + LL+ V ETQ  GG+ TADGSRKRT GGVFF LL+  M P   K+L  AD  R K+E +  R+   KR  E    G D 
Sbjct:   75 GAKRGSTKREEGVAKSARRALDEQNIRLLREAIIAIGAKAAKRLLKRVVETQRDGGLATADGSRKRTPGGVFFHLLRDEMTPEAYKQLMKADSKRKKRELEERRKQREKRAREGGTPGGDA 195

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: A0A7D9EF16_PARCT (Phosphorylated adapter RNA export protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EF16_PARCT)

HSP 1 Score: 72.4 bits (176), Expect = 1.480e-10
Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 0

Query:  209 VCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKK--HMEPARLKELYADELRVKKEKDRARRAA-NKRK 302
            + ERL E K+ L+ + V  IG  K  DL    ++ Q  GGM T +GSR+RT+GGVF TLLK   +    ++KE++ D+L +KKE  + ++AA N+RK
Sbjct:  166 IAERLEEHKFSLIIETVKIIGGKKALDLFNETKQVQLNGGMKTCNGSRRRTSGGVFLTLLKSSNYATDEQIKEIFKDDLSIKKEALKRKKAAYNQRK 262

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: A0A8J5D9L3_9CHEL (Phosphorylated adapter RNA export protein n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5D9L3_9CHEL)

HSP 1 Score: 70.1 bits (170), Expect = 1.130e-9
Identity = 31/87 (35.63%), Postives = 58/87 (66.67%), Query Frame = 0

Query:  209 VCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLK--KHMEPARLKELYADELRVKKEKDR 293
            +C+ L EPK++L+  V++ +G  K  +LL+  +E +E GG+ T +G R+RT GG++FTLLK  K++   +++ +++ E  + K K +
Sbjct:  214 ICKTLNEPKHHLIQSVINVVGETKAMELLKMTEEVEENGGLMTQNGKRRRTPGGIYFTLLKSDKNISKKQMRSIFSTEKEIFKNKQK 300

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: UPI001069D661 (uncharacterized protein LOC114518314 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069D661)

HSP 1 Score: 68.6 bits (166), Expect = 3.310e-9
Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 0

Query:  209 VCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKK--HMEPARLKELYADELRVKKE 290
            + ERL E K+ L+ + V  IG  K  +L +  +  Q +GGM T +GSR+RT+GGVFFTLLK   +    ++KE++ ++L +KKE
Sbjct:  146 IAERLEEHKFALIIETVKVIGGKKVLELFKETKRIQLSGGMKTCNGSRRRTSGGVFFTLLKSSNYATDEQIKEIFKEDLTMKKE 229

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: A0A293N1Q8_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293N1Q8_ORNER)

HSP 1 Score: 65.9 bits (159), Expect = 1.500e-8
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0

Query:  206 AEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLK 269
            A+ + ERL EPK +L+ +VV  +G  + R LL   ++ +  GG+ T DGSR+RTAGGVFF LLK
Sbjct:  131 AQEIAERLQEPKKHLLERVVRILGEARARQLLSMTEDVESAGGLLTIDGSRRRTAGGVFFHLLK 194

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: A0A5B8MI43_9CHLO (Phosphorylated adapter RNA export protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MI43_9CHLO)

HSP 1 Score: 65.9 bits (159), Expect = 1.730e-8
Identity = 44/119 (36.97%), Postives = 67/119 (56.30%), Query Frame = 0

Query:  191 NDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEPARLKELYADELRVKKEKDRARRAANKRKAEAALAG 309
            N+ ++ GR   IKE    VC++L EPK +LM +V+  +G     +L++ V+  +E GG   ADG+R+RT GGVF  LLK  +   +   ++ DE    KE  + R+A  +R   A  AG
Sbjct:  139 NENRSTGR--FIKE----VCQKLNEPKQHLMRKVMEQVGKIFIMELVDQVERVEEEGGQFVADGTRRRTKGGVFLNLLKAQVTKEQWDTIFEDE----KEAQKRRKAMKRRLRYAGEAG 247

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: A0A0N8CKZ4_9CRUS (Phosphorylated adapter RNA export protein n=5 Tax=Daphnia magna TaxID=35525 RepID=A0A0N8CKZ4_9CRUS)

HSP 1 Score: 66.6 bits (161), Expect = 1.930e-8
Identity = 42/107 (39.25%), Postives = 64/107 (59.81%), Query Frame = 0

Query:  201 TIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHME--PARLKELYADELRVKKEKDRARRAANKRKAEA 305
            T+ E A+ +  +L E K  L+ +VV  IG   T  L    QET+  GG+  ADGSR+RT GGVF  LL+ H E    +++E+++ E + K++  R  RA  +R+A+A
Sbjct:  225 TVLEVAQDITVKLHEEKMDLILRVVEIIGKELTIQLFRETQETENDGGIMVADGSRRRTPGGVFLYLLRNHEEIPMEKIREVFSQETKAKEQHKRTIRA-KRRQAQA 330

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BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Match: E9GGD8_DAPPU (Phosphorylated adapter RNA export protein n=3 Tax=Daphnia TaxID=6668 RepID=E9GGD8_DAPPU)

HSP 1 Score: 66.2 bits (160), Expect = 2.650e-8
Identity = 44/120 (36.67%), Postives = 67/120 (55.83%), Query Frame = 0

Query:  189 PKNDGKARGRNV---------TIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHME--PARLKELYADELRVKKEKDRARRA 297
            PK+  KAR R V         T+ E A+ +  +L E K  L+ +VV  +G   T  L    QET+  GG+  ADGSR+RT GGVF  LL+ H E    +++E++++E + +++  R  RA
Sbjct:  207 PKSKVKARLRRVEELSVTEKSTVMEVAQDIALKLHEEKMDLILRVVEILGKEITIKLFYETQETENDGGIMVADGSRRRTPGGVFLYLLRNHEEIPMEKIREIFSEETKAREQHKRTLRA 326

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig9535.31144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHZ0_ECTSI	9.900e-227	96.79	Phosphorylated adapter RNA export protein n=2 Tax=...	[more]
A0A835ZKK4_9STRA	1.780e-20	45.54	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A8J2X059_9STRA	7.950e-11	39.67	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A7D9EF16_PARCT	1.480e-10	43.30	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A8J5D9L3_9CHEL	1.130e-9	35.63	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
UPI001069D661	3.310e-9	42.86	uncharacterized protein LOC114518314 n=1 Tax=Dendr...	[more]
A0A293N1Q8_ORNER	1.500e-8	50.00	Phosphorylated adapter RNA export protein (Fragmen...	[more]
A0A5B8MI43_9CHLO	1.730e-8	36.97	Phosphorylated adapter RNA export protein n=1 Tax=...	[more]
A0A0N8CKZ4_9CRUS	1.930e-8	39.25	Phosphorylated adapter RNA export protein n=5 Tax=...	[more]
E9GGD8_DAPPU	2.650e-8	36.67	Phosphorylated adapter RNA export protein n=3 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019385	Phosphorylated adapter RNA export protein, RNA-binding domain	PFAM	PF10258	RNA_GG_bind	coord: 207..284 e-value: 1.3E-22 score: 79.6
IPR038092	Phosphorylated adapter RNA export protein, RNA-binding domain superfamily	GENE3D	1.10.10.1440		coord: 198..297 e-value: 4.4E-23 score: 83.1
IPR039047	Phosphorylated adapter RNA export protein	PANTHER	PTHR13135	CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26	coord: 176..303

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig9535	contig	Ecto-sp8_S_contig9535:2278..4433 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig9535.31144.1	mRNA_Ecto-sp8_S_contig9535.31144.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig9535 1577..4433 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig9535.31144.1 ID=prot_Ecto-sp8_S_contig9535.31144.1|Name=mRNA_Ecto-sp8_S_contig9535.31144.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=375bp
MSTFDDDDMDFGGDDDGDDFLTGKLAALGIDEDLELSGGEEEDDNPAPAT
DPAADSSNKPPGVVAPSPQQASASTAVAAVPAASRSTAPAPADDWGAPPS
EGCSSGDAGIWGEVDSWGETRKATPTAEAPPAAGGGRGTAVLEDGELVQM
IDQPLRASRGREQRSARDSGRGGGRRGGGGGGRGKRGRPKNDGKARGRNV
TIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMP
TADGSRKRTAGGVFFTLLKKHMEPARLKELYADELRVKKEKDRARRAANK
RKAEAALAGEDVMTPRNPPRNRGRGGGGGGGATRAGRDMGKWAGPTAGAG
GRDGCGDAVAAKRARAGISSLSKE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019385	PHAX_RNA-binding_domain
IPR038092	PHAX_RNA-binding_sf
IPR039047	PHAX