prot_Ecto-sp8_S_contig9534.31140.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig9534.31140.1
Unique Name	prot_Ecto-sp8_S_contig9534.31140.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	336

Homology

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: D8LF74_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF74_ECTSI)

HSP 1 Score: 619 bits (1595), Expect = 4.410e-217
Identity = 325/334 (97.31%), Postives = 329/334 (98.50%), Query Frame = 0

Query:    1 MRCCGKRALVAAFGQALLKHGRWTNSFADSAAKIVPAVDTLSKCSSQQSKSTAAVARRASRGRTGCWAAATAVGCSEEAFATGGAERVAELLAGESAGEGAVFYNRVGTINRDLSVLMANVLAEERVRERLAGKKRKKRQIPPTSRPSPADGTLRSRSSLAHDMAQSGEARSSKVWGVRAFVKGALGRLSRGCWGGGVERVSNNEDQQDEPREDEDGLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGLGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSGAQ 334
            MRC GKRALVAAFGQALLKHGRWTNSFADSAAKIVPA+DTLSKCSSQQSKSTAAVARRASRGRTGCWAAATAVGCSEEAFATGGAERVAELLAGESAGEGAVFYNRVG INRDLSVLMANVLAEERVRERLAGKKRKKRQIPPTSRPSP DGTLRSRSSLAHDMAQSGEAR SKVWGVRAFVKGALGRLSRGCWG GVER+SNN+DQQDEPREDEDGLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGG+GTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSGAQ
Sbjct:    1 MRCGGKRALVAAFGQALLKHGRWTNSFADSAAKIVPAIDTLSKCSSQQSKSTAAVARRASRGRTGCWAAATAVGCSEEAFATGGAERVAELLAGESAGEGAVFYNRVGAINRDLSVLMANVLAEERVRERLAGKKRKKRQIPPTSRPSPTDGTLRSRSSLAHDMAQSGEARRSKVWGVRAFVKGALGRLSRGCWGVGVERMSNNKDQQDEPREDEDGLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGIGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSGAQ 334

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: F0YPE0_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPE0_AURAN)

HSP 1 Score: 126 bits (317), Expect = 5.870e-30
Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = 0

Query:  216 DGLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGLGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSG 332
            DG+ +LDA AA+G+R++RY  EVPGV++VVAND D  A     + A + G     E H GDA+D + ++R  G   +D+ID+DP+G  A FLDA+VQAV DGGLLCVTSTDM VLSG
Sbjct:   95 DGIRVLDALAATGLRSIRYAKEVPGVRKVVANDVDADAAAACGRNAAENGAADICEAHCGDAVDFMTASRGKGSQGFDVIDLDPYGSCAPFLDAAVQAVNDGGLLCVTSTDMTVLSG 211

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: F0Y1C9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1C9_AURAN)

HSP 1 Score: 122 bits (306), Expect = 5.760e-28
Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = 0

Query:  218 LLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGLGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSG 332
            + +LDA AA+G+R++RY  EVPGV++VVAND D  A     + A + G     E H GDA+D + ++R  G   +D+ID+DP+G  A FLDA+VQAV DGGLLCVTSTDM VLSG
Sbjct:    1 IRVLDALAATGLRSIRYAKEVPGVRKVVANDVDADAAAACGRNAAENGAADICEAHCGDAVDFMTASRGKGSQGFDVIDLDPYGSCAPFLDAAVQAVNDGGLLCVTSTDMTVLSG 115

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: A0A7S1A1K3_NOCSC (tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A1K3_NOCSC)

HSP 1 Score: 121 bits (304), Expect = 5.700e-27
Identity = 67/125 (53.60%), Postives = 89/125 (71.20%), Query Frame = 0

Query:  217 GLLILDAFAASGVRALRYLTEV----PGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARA---GGLGT--YDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSG 332
            GL IL+A +A+G+R++RY  E+     G++R+VAND DE A+  IR+  V  G+GS +E   GDA   +Y+ +A   GGLG   Y +IDIDP+G A+ FLDA+VQAV DGGLLC+TSTDMPVL G
Sbjct:   94 GLHILEALSATGIRSIRYAKELGEGPEGIRRIVANDLDETAVAHIRRNLVHNGIGSCIEATCGDAAAHMYAHKARGPGGLGDAGYAVIDIDPYGTASPFLDAAVQAVADGGLLCITSTDMPVLGG 218

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: F6SZY0_CIOIN (tRNA (guanine(26)-N(2))-dimethyltransferase n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6SZY0_CIOIN)

HSP 1 Score: 115 bits (288), Expect = 6.500e-25
Identity = 67/136 (49.26%), Postives = 92/136 (67.65%), Query Frame = 0

Query:  201 VSNNEDQQDE---PRED-EDGLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGLGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSG 332
            +S NED+ +E   P E  E+G+ IL+A +A+G+R++R+  E+PGV+R+VAND    A   I +      VG  +E + GDA   +YS R G L  +D+IDIDP+G AA FLDA+VQAV  GGLLCVT TDM V++G
Sbjct:   89 ISLNEDETEEKIYPGEKYEEGVTILEALSATGLRSVRFAKELPGVKRIVANDLSHDAFQLIERNIKHNEVGHLVEANLGDATTFMYSNR-GKLKEFDVIDIDPYGSAACFLDAAVQAVKPGGLLCVTCTDMAVMAG 223

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: A0A1Y2H3A1_9FUNG (tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H3A1_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 8.340e-25
Identity = 58/119 (48.74%), Postives = 86/119 (72.27%), Query Frame = 0

Query:  217 GLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKL-EVHRGDALDTLYSARAGGLGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSGAQ 334
            G+ IL+A +ASG+R++RY  E+P V+ ++ ND +  A+ +I++ A   G+ S L E H+GDA+D LY  R   L  YD+ID+DP+G A+ F+D +VQAV+DGGLLCVT TD+ VL+G+ 
Sbjct:  178 GITILEALSASGLRSIRYAKEIPNVKHILTNDLEADAVASIKRNAEFNGISSDLLEPHQGDAIDVLYQHRD-PLKRYDVIDLDPYGTASPFIDGAVQAVSDGGLLCVTCTDLGVLAGSN 295

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: A0A836C8Z8_9STRA (tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z8_9STRA)

HSP 1 Score: 114 bits (286), Expect = 9.830e-25
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 0

Query:  217 GLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGV-GSKLEVHRGDALDTLYSARAGGLGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSGAQ 334
            G++ILDA AA+ +R++RY  E+PGV++VVAND D AA+   R+ A    V   KL+V +GDA   +Y+ R+     +D+ID+DP+G AA F+D +VQAV  GGLLCVTSTDM VL GA 
Sbjct:   46 GIVILDALAATALRSIRYTKEIPGVRKVVANDLDAAAVEAARKNAEFNNVEAGKLDVLQGDATLLMYTRRSHEQ-QFDVIDLDPYGSAAPFVDGAVQAVKSGGLLCVTSTDMAVLGGAN 163

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: A0A7S3ZTX3_9STRA (tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTX3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.400e-24
Identity = 59/116 (50.86%), Postives = 82/116 (70.69%), Query Frame = 0

Query:  217 GLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGLGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSG 332
            GL +LDA AA+G+R++RY  EVPGV++V++ND +  A    ++ A   G  S +E   GDA+  + ++R      YD+ID+DP+G AA FLD +VQA++DGGLLCVTSTDM VLSG
Sbjct:  147 GLRVLDALAATGLRSVRYAKEVPGVKKVISNDIEAEAAKKCQENATSNGCESLVEAVCGDAVAHMINSRGD---PYDVIDLDPYGSAAPFLDGAVQAISDGGLLCVTSTDMTVLSG 259

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: UPI001C91E44A (probable tRNA (guanine(26)-N(2))-dimethyltransferase isoform X8 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C91E44A)

HSP 1 Score: 114 bits (286), Expect = 1.430e-24
Identity = 81/234 (34.62%), Postives = 129/234 (55.13%), Query Frame = 0

Query:  102 VFYNRVGTINRDLSVLMANVLAEER---VRERLAGKKRKKRQIPPTSRPSPADGTLRSRSSLAHDMAQSGEARSSKVWGVRAFVKGALGRLSRGCWGGGVERVSNNEDQQDEPREDEDGLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGLGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSG 332
            VFYN V   NRDLSV +  +LA++    +RE+ A ++ K+ ++   +  +  D   + R     ++ +SGE++  +                    GG  E   N  ++     + E GL +L+A AASG+R+ R+  EV G+++VVAND   AA+ ++R+     GV   +E H+GDA   +Y AR      +D++D+DP+G  A FLD++VQAV DGG+L VT TD+ +L G
Sbjct:   68 VFYNPVQEFNRDLSVSVIRILAQQHQRNLREKKAKRQAKEAKLAENANKTAEDQRAKERVGK-EELKESGESQDKEAHPAN---------------GGSQE---NGAEELKPGVKCETGLRVLEALAASGLRSCRFAREVGGLRQVVANDLSAAAVESMRRNVEHNGVQELVEPHQGDASMLMYGARKE---RFDVVDLDPYGSPAVFLDSAVQAVADGGVLQVTCTDLAILCG 279

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BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Match: A0A6A4V8X3_AMPAM (tRNA (guanine(26)-N(2))-dimethyltransferase n=9 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4V8X3_AMPAM)

HSP 1 Score: 114 bits (286), Expect = 1.580e-24
Identity = 81/234 (34.62%), Postives = 129/234 (55.13%), Query Frame = 0

Query:  102 VFYNRVGTINRDLSVLMANVLAEER---VRERLAGKKRKKRQIPPTSRPSPADGTLRSRSSLAHDMAQSGEARSSKVWGVRAFVKGALGRLSRGCWGGGVERVSNNEDQQDEPREDEDGLLILDAFAASGVRALRYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGLGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSG 332
            VFYN V   NRDLSV +  +LA++    +RE+ A ++ K+ ++   +  +  D   + R     ++ +SGE++  +                    GG  E   N  ++     + E GL +L+A AASG+R+ R+  EV G+++VVAND   AA+ ++R+     GV   +E H+GDA   +Y AR      +D++D+DP+G  A FLD++VQAV DGG+L VT TD+ +L G
Sbjct:   68 VFYNPVQEFNRDLSVSVIRILAQQHQRNLREKKAKRQAKEAKLAENANKTAEDQRAKERVGK-EELKESGESQDKEAHPAN---------------GGSQE---NGAEELKPGVKCETGLRVLEALAASGLRSCRFAREVGGLRQVVANDLSAAAVESMRRNVEHNGVQELVEPHQGDASMLMYGARKE---RFDVVDLDPYGSPAVFLDSAVQAVADGGVLQVTCTDLAILCG 279

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig9534.31140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LF74_ECTSI	4.410e-217	97.31	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
F0YPE0_AURAN	5.870e-30	54.70	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
F0Y1C9_AURAN	5.760e-28	53.91	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A7S1A1K3_NOCSC	5.700e-27	53.60	tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Ta...	[more]
F6SZY0_CIOIN	6.500e-25	49.26	tRNA (guanine(26)-N(2))-dimethyltransferase n=2 Ta...	[more]
A0A1Y2H3A1_9FUNG	8.340e-25	48.74	tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Ta...	[more]
A0A836C8Z8_9STRA	9.830e-25	52.10	tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Ta...	[more]
A0A7S3ZTX3_9STRA	1.400e-24	50.86	tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Ta...	[more]
UPI001C91E44A	1.430e-24	34.62	probable tRNA (guanine(26)-N(2))-dimethyltransfera...	[more]
A0A6A4V8X3_AMPAM	1.580e-24	34.62	tRNA (guanine(26)-N(2))-dimethyltransferase n=9 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002905	tRNA methyltransferase, Trm1	PFAM	PF02005	TRM	coord: 100..334 e-value: 2.2E-39 score: 135.7
IPR002905	tRNA methyltransferase, Trm1	PANTHER	PTHR10631	N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE	coord: 90..334
IPR002905	tRNA methyltransferase, Trm1	PROSITE	PS51626	SAM_MT_TRM1	coord: 82..335 score: 51.294
None	No IPR available	PANTHER	PTHR10631:SF3	TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE	coord: 90..334
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 29..335
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 8..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..7
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..28
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 99..333

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig9534	contig	Ecto-sp8_S_contig9534:225..1856 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig9534.31140.1	mRNA_Ecto-sp8_S_contig9534.31140.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig9534 225..1856 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig9534.31140.1 ID=prot_Ecto-sp8_S_contig9534.31140.1|Name=mRNA_Ecto-sp8_S_contig9534.31140.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=336bp
MRCCGKRALVAAFGQALLKHGRWTNSFADSAAKIVPAVDTLSKCSSQQSK
STAAVARRASRGRTGCWAAATAVGCSEEAFATGGAERVAELLAGESAGEG
AVFYNRVGTINRDLSVLMANVLAEERVRERLAGKKRKKRQIPPTSRPSPA
DGTLRSRSSLAHDMAQSGEARSSKVWGVRAFVKGALGRLSRGCWGGGVER
VSNNEDQQDEPREDEDGLLILDAFAASGVRALRYLTEVPGVQRVVANDYD
EAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGLGTYDLIDIDPF
GCAAGFLDASVQAVTDGGLLCVTSTDMPVLSGAQV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002905	Trm1
IPR029063	SAM-dependent_MTases