prot_Ecto-sp8_S_contig9529.31133.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9529.31133.1
Unique Nameprot_Ecto-sp8_S_contig9529.31133.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length138
Homology
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: D8LQ56_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE), Vesicle-associated membrane protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ56_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 2.230e-70
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query:    9 KVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKNNSD 137
            KVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKNNSD
Sbjct:   97 KVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKNNSD 225          
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: A0A835YU71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU71_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.590e-39
Identity = 80/149 (53.69%), Postives = 101/149 (67.79%), Query Frame = 0
Query:    9 KVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVF-----------------------QNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKN 134
            KVG+KSL+AKE  LSRTM+SSF+D+C+KYDD++NVD++A+VQ KVD VK  M++NI QMLANEE L+ IS NAENLNEQA+                         QNRS+ALRR MRCKA+KMW LLA           VP+A+++KN
Sbjct:   98 KVGEKSLSAKEDTLSRTMRSSFADICLKYDDVKNVDKLASVQGKVDAVKTKMEENISQMLANEETLESISANAENLNEQARXXXXXXXXXXXXXXXXXXXXXXXXXQNRSTALRRNMRCKALKMWFLLAFVITIVLIIIIVPLAMYSKN 246          
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: B8C8V5_THAPS (Synaptobrevin (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8V5_THAPS)

HSP 1 Score: 93.6 bits (231), Expect = 1.480e-21
Identity = 53/119 (44.54%), Postives = 71/119 (59.66%), Query Frame = 0
Query:   16 TAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKN 134
            +A    L++  KS  S  C KYDD   VD+ +A+  KV+ VKV MQDNI  ML N E+ + ++E +  LNEQA VFQ +S  LR+QMRCK IKM ++L            VP+ + AKN
Sbjct:   28 SATTNSLTKKSKSILSSYCKKYDDASKVDKASALNTKVEEVKVQMQDNIAAMLKNTEQAESLAERSNQLNEQANVFQKKSKDLRKQMRCKNIKMTIILVTLVVGVLVIILVPLIVRAKN 146          
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: A0A7R9Z383_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z383_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.240e-21
Identity = 53/127 (41.73%), Postives = 80/127 (62.99%), Query Frame = 0
Query:    9 KVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKNN 135
            + G ++ +A    L++  K   S +C KYDD+ NVD+ +++  KV+ VKV MQDNI  ML N E+ + ++E ++ LNEQA VF+ +S+ LR+QMRCK +KM L+L            VP+ + AKNN
Sbjct:  168 QFGLQAKSATTNSLTKKSKPMLSTMCNKYDDLSNVDKASSLIGKVEEVKVQMQDNIAAMLKNTEQAESLAERSDALNEQASVFKKKSTDLRKQMRCKNLKMTLILVFLIVGILAIILVPLIMKAKNN 294          
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: A0A6V2A733_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A733_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 6.860e-20
Identity = 49/117 (41.88%), Postives = 75/117 (64.10%), Query Frame = 0
Query:   16 TAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHA 132
            +A    L++  K   S +C KY D+ NVD+ +A+ DKVD VK++MQDNI  ML N E+ + +++ +E LNEQA VF+ +S+ L++QM+CK +KM ++L L          VP+ L A
Sbjct:  156 SATTNSLTKKSKPMLSSICKKYSDLNNVDKASALIDKVDQVKISMQDNIAVMLKNTEQAETLADKSEQLNEQATVFKKKSTDLKKQMKCKNLKMTIILGLLIFGILAVILVPLILKA 272          
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: A0A7S3Q7P0_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7P0_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.570e-19
Identity = 53/130 (40.77%), Postives = 77/130 (59.23%), Query Frame = 0
Query:    7 TAKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKNNS 136
            + K+GD+   A    L+R  K   +  C KYDD+ NVD+ +A+  KVD VKV MQDNI  ML N E+ + IS+ A  LNE   VF+ +S+ L+RQM+CK +KM +++A+          +P+   AK  S
Sbjct:  125 STKMGDEIKDAATNSLNRKSKPILTKFCKKYDDVNNVDKASALIGKVDGVKVQMQDNIATMLQNMEQTEAISDQANQLNEXXXVFKKQSTDLKRQMKCKNLKMTIIVAVLVLGILLVILLPLISKAKKAS 254          
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: W7U318_9STRA (R-snare vamp72-family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U318_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 9.960e-19
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    8 AKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKNNSD 137
            AK G KSL  KE GL ++       LC KYD++  VD++AAV +KVD VK+ +Q+N+Q  LAN   LD I + AE+L  QA +F+  ++ L++QM  K ++M +++ L          +PIA+ +K   D
Sbjct:  101 AKTGTKSLEVKEKGLDKSSGEMLRKLCEKYDNLAEVDKLAAVMNKVDAVKLVLQENVQVALANCVALDNIEKAAEDLQAQAGMFKRNATTLKKQMCWKQLRMKMVMGLAILAILLVIIIPIAVASKRMHD 230          
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: A0A7S2KAE4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAE4_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.540e-18
Identity = 46/127 (36.22%), Postives = 76/127 (59.84%), Query Frame = 0
Query:    9 KVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAKNN 135
            K G  +++A    L++       + C KYDD+ +VD+ ++V +KV+ VK+ MQDNI  ML N E  +++ + +  LNEQA VF+  S+ L++ M+CK +KM +LL L          VP+ L A+++
Sbjct:  128 KFGLMAMSATTNSLTKKATPMLKEACKKYDDLSSVDKTSSVLEKVEGVKIQMQDNIAAMLVNTETAEELQDKSSQLNEQASVFKKNSTTLKKHMKCKNLKMTILLVLVVVGVLAIILVPLILRAQDD 254          
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: K0SRE0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SRE0_THAOC)

HSP 1 Score: 84.7 bits (208), Expect = 2.990e-17
Identity = 54/122 (44.26%), Postives = 71/122 (58.20%), Query Frame = 0
Query:   15 LTAKEG---GLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRRQMRCKAIKMWLLLALXXXXXXXXXXVPIALHAK 133
            L AK G    L++  K   SD C KYDD   VD+ +A+  KV+ VKV MQDNI  ML N E+ + ++E +  LNEQA V Q +S  LR+QMRCK IKM ++L            VP+ + AK
Sbjct:  115 LQAKSGTTNALTKKSKKVLSDYCKKYDDSTKVDKASALNTKVEEVKVQMQDNIATMLKNTEQAENLAERSNQLNEQANV-QKKSKDLRKQMRCKNIKMTIILTTLVVGVLLVILVPLIMKAK 235          
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Match: A0A7S2XW80_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW80_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.300e-15
Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    9 KVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQDKVDVVKVTMQDNIQQMLANEE 72
            KVGD+SL+ KEGGL+ T K  F+++C +Y+D+   D++AAVQ KVDVVK  M+DNI +ML N+E
Sbjct:   49 KVGDRSLSVKEGGLNGTCKKMFTNICHRYEDVEGADKLAAVQGKVDVVKSIMEDNISKMLKNQE 112          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9529.31133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ56_ECTSI2.230e-70100.00Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835YU71_9STRA1.590e-3953.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B8C8V5_THAPS1.480e-2144.54Synaptobrevin (Fragment) n=1 Tax=Thalassiosira pse... [more]
A0A7R9Z383_9STRA3.240e-2141.73Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6V2A733_9STRA6.860e-2041.88Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S3Q7P0_9STRA1.570e-1940.77Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
W7U318_9STRA9.960e-1939.23R-snare vamp72-family n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S2KAE4_9STRA7.540e-1836.22Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
K0SRE0_THAOC2.990e-1744.26Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2XW80_9STRA1.300e-1556.25Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..101
NoneNo IPR availableGENE3D1.20.5.110coord: 14..129
e-value: 5.2E-24
score: 86.3
NoneNo IPR availablePANTHERPTHR45701:SF9VAMP (VESICLE ASSOCIATED MEMBRANE PROTEIN) HOMOLOGcoord: 43..133
NoneNo IPR availablePANTHERPTHR45701FAMILY NOT NAMEDcoord: 43..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 41..105
NoneNo IPR availableTMHMMTMhelixcoord: 109..131
IPR001388SynaptobrevinPRINTSPR00219SYNAPTOBREVNcoord: 70..89
score: 24.73
coord: 50..69
score: 32.43
coord: 106..125
score: 32.57
IPR001388SynaptobrevinPFAMPF00957Synaptobrevincoord: 43..128
e-value: 8.9E-26
score: 89.5
IPR001388SynaptobrevinPROSITEPS50892V_SNAREcoord: 45..105
score: 12.152
IPR016444Synaptobrevin/Vesicle-associated membrane proteinPIRSFPIRSF005409VAMP-5_synaptobrevincoord: 12..135
e-value: 5.6E-27
score: 91.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9529contigEcto-sp8_S_contig9529:2852..4805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9529.31133.1mRNA_Ecto-sp8_S_contig9529.31133.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9529 1790..6046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9529.31133.1 ID=prot_Ecto-sp8_S_contig9529.31133.1|Name=mRNA_Ecto-sp8_S_contig9529.31133.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=138bp
MMGCHDTAKVGDKSLTAKEGGLSRTMKSSFSDLCIKYDDIRNVDRMAAVQ
DKVDVVKVTMQDNIQQMLANEERLDQISENAENLNEQAKVFQNRSSALRR
QMRCKAIKMWLLLALVVIILLIIIIVPIALHAKNNSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001388Synaptobrevin
IPR016444Synaptobrevin/VAMP