prot_Ecto-sp8_S_contig9522.31119.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9522.31119.1
Unique Nameprot_Ecto-sp8_S_contig9522.31119.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length1147
Homology
BLAST of mRNA_Ecto-sp8_S_contig9522.31119.1 vs. uniprot
Match: A0A6H5JHC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC6_9PHAE)

HSP 1 Score: 1293 bits (3345), Expect = 0.000e+0
Identity = 927/1168 (79.37%), Postives = 952/1168 (81.51%), Query Frame = 0
Query:    1 EKFSSWKVGGRGLLGRGSAKKNGRLLVTGLGSAGRVGGPARASAPVLASPGLYLDGARRGGGGRARSSRAGGGVSSPGDASDVFGMSDGDETERTMLDSTDCDSKAANRGHVSQSEADGSETDDGPADAATDGSSRKLPRRSS-VRGAQAGTGXXXXXXXXRQSRVSPGPSPRLAPKGAGGSGNGGITTPVNGTKRRGCSAKNPMGEPESAARGSGGAAGGRGATTPASGYAADLSAGTTRVSKARARTGPAAGGGCSGSSG--------EGGRRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNELAARKCVMCQSAAPRASRRPPRARGIRNGTDPAAHSERGMSSPPPRXXXXXXXXXXXXXXXXXXXXXXXXERGSSSAAAAAGDVSSPNGTWEGYEMGRSTASSSAKSTRGPPPLAAPVSNRKSCPKAGTDSAGINRGVEPSPASGDSHGKHQQGLLQGSGGIGGATPPGGDEPHRPPVVASLPGLASPGTSLFRRAAAGAVPGSGVVDRAGGGASSSHGRASAGDTGGDSGGRNLATGEKVVGGRRGGSDAGVKGGRAAA---TVNTRPGGGQGAGVVSLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPPDAAVGGAGAETVAAGTGPGVAGAAVDGAGLRDAARGGDDGGXXXXXXXXXXXXXXXXXXXXXGMEVAPQVGVHPRGKDADTPEESDTETVQRSCHDGSSPKEGGSPADDPETEAPPCGQTLLERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVDAAQGSKTGERSASVADVRVGTAAVEMGPLGAEGTGRSGVGERRGSARLRNGGVGGXXXXXXXXXXGGVACSTSPLPGEGQEAKDGGALEKAVAAAGVDGAGRRDGGDAVREDASAAPVASPSAA---------DTVSVEDAAPAGRAGSKRRASTRGGVAASVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGVASSSAAARVADXXXXXXXGPAVSSQSLDDMTEAVVAMSALVGEDRTVGQPGASQENADSVENHDTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVANGKGSSTDVAKEAGAAVSEETRGGDKSKTGLVGTKRGLARDEDGGEGTGGRQGRRG 1147
            EKFSSWKVGGRGLLGRGSAKK GRLLV GLGSAGRVGGPARA+A VLAS GL L+G RRGGGGRAR SRAGGGVSSPGD SDVFGMSDGDETERTMLDSTDCDSKAANRG VSQSEAD SETDDG A+AAT GSSRKL RRSS +RGAQAGT XXXXXXXXRQSRVSPGPSPRLAP G GGSGNGGITTP++G  RRG SAKNPMGEPE   RGSGGAAGGRGATTPASGYAADLSAGTTRVSKAR RTGPAAG                + G+RSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLN+LAARKC MC+SAAPRA    PR RG RNGTDPAA SER MSSP PR        XXXXXXXXXXXXXXX ERG  SAAAAAGDVSSPNGTWEGYEMGRSTASSSAKSTRGPPPLAAPVSNRKSCPK GTDSAGI+RGV+PSPASGDSHGKHQQGLLQGSGGIGGATPPGGD P  PP  ASL  LASP TSLFRRAAAGA PGSGVVDR  G ASSS G AS  D GGD GG +LATGEKVVGGRRGGSDAGVKGGRAAA   T NT PGGGQ AGV SLPRPCDEEEGS APAIRLFEAVPSPS SLLGRPPPDAAVGGAGAETVAAGTGPGVAGA VDGAGLRDAARGGD GG XXXXXXXXXXXXXXXXXXXX +EVA QVGV PRGKDADTPEESD ETVQRSCHDGS PKEGGSPADDP TEAPP GQTLLERA XXXXXXXXXXXXXXXXXXXXX         VVDAAQGSK GERSASVADVRVGTAAVEMGPLG EGTGRSGVGERRGSARLRNGGVG            GVA S+SPLPGEGQE + GG   KAV AAGVD AG+ D GDA+REDASAAPVAS SAA         D VSVEDAAP GR GSKRRASTRGGVAASVAXXXX    XXXXXXXXXXXXXXXXXX                               AGG  SS+AAARVA        GPAVSSQSLDD+TEAVVAMSALVGEDRTVGQPG S+EN D VENH T AXXXXXXXXXXXXXXXXXXXXXXXXX       KV +GKGSSTDVA EAG  VSEE   GDKSK GLVGTKRGL+RDE+GGE TG + GRRG
Sbjct:  420 EKFSSWKVGGRGLLGRGSAKKTGRLLVGGLGSAGRVGGPARAAAQVLASAGLDLEGERRGGGGRARGSRAGGGVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGLVSQSEADDSETDDGSAEAATGGSSRKLSRRSSSIRGAQAGT-XXXXXXXXRQSRVSPGPSPRLAPNGVGGSGNGGITTPLSGMWRRGRSAKNPMGEPEGVVRGSGGAAGGRGATTPASGYAADLSAGTTRVSKARPRTGPAAGXXXXXXXXXXXXXXXXDDGKRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNDLAARKCAMCRSAAPRAXXXXPRTRGTRNGTDPAARSEREMSSPSPRGGAGIPPAXXXXXXXXXXXXXXXGERGLPSAAAAAGDVSSPNGTWEGYEMGRSTASSSAKSTRGPPPLAAPVSNRKSCPKVGTDSAGIDRGVQPSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAPPHPPAAASLAELASPDTSLFRRAAAGAAPGSGVVDRVRGVASSSCGEASGSDAGGDCGGGSLATGEKVVGGRRGGSDAGVKGGRAAAASATANTTPGGGQRAGVGSLPRPCDEEEGSAAPAIRLFEAVPSPSISLLGRPPPDAAVGGAGAETVAAGTGPGVAGAVVDGAGLRDAARGGDGGGHXXXXXXXXXXXXXXXXXXXXXVEVAAQVGVRPRGKDADTPEESDAETVQRSCHDGSPPKEGGSPADDPGTEAPPDGQTLLERAXXXXXXXXXXXXXXXXXXXXXX---------VVDAAQGSKAGERSASVADVRVGTAAVEMGPLGNEGTGRSGVGERRGSARLRNGGVGVRRREQRGKKYEGVARSSSPLPGEGQEEQGGGGSGKAVGAAGVDRAGQGDEGDAIREDASAAPVASRSAAEEKASAAAADPVSVEDAAPTGRGGSKRRASTRGGVAASVAXXXXAVSGXXXXXXXXXXXXXXXXXXAL-----------------------------AGGGTSSNAAARVAAAVSAGKAGPAVSSQSLDDITEAVVAMSALVGEDRTVGQPGVSRENVDLVENHGTTAXXXXXXXXXXXXXXXXXXXXXXXXXR------KVTDGKGSSTDVAYEAGEVVSEEASSGDKSKAGLVGTKRGLSRDENGGEETGRKHGRRG 1542          
BLAST of mRNA_Ecto-sp8_S_contig9522.31119.1 vs. uniprot
Match: D7G1G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G0_ECTSI)

HSP 1 Score: 1224 bits (3167), Expect = 0.000e+0
Identity = 865/1066 (81.14%), Postives = 874/1066 (81.99%), Query Frame = 0
Query:    1 EKFSSWKVGGRGLLGRGSAKKNGRLLVTGLGSAGRVGGPARASAPVLASPGLYLDGARRGGGGRARSSRAGGGVSSPGDASDVFGMSDGDETERTMLDSTDCDSKAANRGHVSQSEADGSETDDGPADAATDGSSRKLPRRSSVRGAQAGTGXXXXXXXXRQSRVSPGPSPRLAPKGAGGSGNGGITTPVNGTKRRGCSAKNPMGEPESAARGSGGAAGGRGATTPASGYAADLSAGTTRVSKARARTGPAAGGGCSGSSGEGGRRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNELAARKCVMCQSAAPRASRRPPRARGIRNGTDPAAHSERGMSSPPPRXXXXXXXXXXXXXXXXXXXXXXXXERGSSSAAAAAGDVSSPNGTWEGYEMGRSTASSSAKSTRGPPPLAAPVSNRKSCPKAGTDSAGINRGVEPSPASGDSHGKHQQGLLQGSGGIGGATPPGGDEPHRPPVVASLPGLASPGTSLFRRAAAGAVPGSGVVDRAGGGASSSHGRASAGDTGGDSGGRNLATGEKVVGGRRGGSDAGVKGGRAAATVNTRPGGGQGAGVVSLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPPDAAVGGAGAETVAAGTGPGVAGAAVDGAGLRDAARGGDDGGXXXXXXXXXXXXXXXXXXXXXGMEVAPQVGVHPRGKDADTPEESDTETVQRSCHDGSSPKEGGSPADDPETEAPPCGQTLLERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVDAAQGSKTGERSASVADVRVGTAAVEMGPLGAEGTGRSGVGERRGSARLRNGGVGGXXXXXXXXXXGGVACSTSPLPGEGQEAKDGGALEKAVAAAGVDGAGRRDGGDAVREDASAAPVASPSAA----------DTVSVEDAAPAGRAGSKRRASTRGGVAASVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGVASSSAAARVADXXXXXXXGPAVSSQSLDDMTEAVVAMSALVGEDRTVGQPGASQENADSVENHDTAA 1056
            EKFSSWKVGGRGLLGRGSAKKNGRLLVTGLGSAGRVGGPARASAPVLASPGLYLDGARRGGGGRARSSRAG GVSSPGD SDVFGMSDGDETERTMLDSTDCDSKAANRGHVSQSEAD SETDDGPADAAT GS RKL RRSS+RG Q G GXXXXXXX RQSRVSPGPSPRLAPKG GGSG GGITTPV+GT+RRGCSAKNPM EPESA RGSGGAAGGRG TTPASGYAADLSAGT+RVSKARARTGPAA           GRRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNELAARKCVMCQSAAPRASRRPPRARG RNGTDPAA SERGMS     XXXXXXXXXXXXXXXXXXXXXXXXERG SSAAAAA                      SAKSTRGPPPLAAPVSNRK CPK GTDSAGI+R VEPS ASG SHGKHQQGLLQG+GGIGGATPPGGD PH PPV ASLPGLASPGTSLFRRAAAGAVPGS VVDRAGG ASSSHG A AGDTGGDSGGR LATGEKVVGGRRG             T+NT PGGGQGAGVVSLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPPDAAV GAGAETVAAGTGPGVAGAAVDGAGLRDAARGGDDGGXXXXXXXXXXXXXXXXXXXXXGMEVAPQVG HPRG DADT EESDTETVQRSCHDGSSPKEGGSPADDP TEAPP GQTLL    XXXXXXXXXXXXXXXXXXXXXXX        VDAAQGS T                        E TGRSGVGERRGSARLRNGGVGG           GVACSTSPLPGEGQEAKDGGA EKAVAAAGVDGAGR DGGDAVREDASAAPVASPSAA           TVSVEDAAPAGRAGSKRRASTR GVAASVA    XXXXXXXXXXXXXXXXXXXXXXXXXX                            GGVASSSAAARVAD       GP VSSQSLDD+TEAVVAMSALVGEDRTVGQPGASQENA+SVENHDTAA
Sbjct:  443 EKFSSWKVGGRGLLGRGSAKKNGRLLVTGLGSAGRVGGPARASAPVLASPGLYLDGARRGGGGRARSSRAGVGVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGHVSQSEADDSETDDGPADAATGGSYRKLSRRSSIRGPQTGAGXXXXXXX-RQSRVSPGPSPRLAPKGVGGSGTGGITTPVSGTRRRGCSAKNPMREPESAVRGSGGAAGGRGTTTPASGYAADLSAGTSRVSKARARTGPAAX--XXXXXXXXGRRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNELAARKCVMCQSAAPRASRRPPRARGTRNGTDPAARSERGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGLSSAAAAAXXXXXXXXXXXXXXXXXXXXXXSAKSTRGPPPLAAPVSNRKLCPKVGTDSAGIDRDVEPSRASGGSHGKHQQGLLQGNGGIGGATPPGGDAPHHPPVAASLPGLASPGTSLFRRAAAGAVPGSSVVDRAGGVASSSHGNAGAGDTGGDSGGRRLATGEKVVGGRRGXXXXXXXXXXXXXTLNTTPGGGQGAGVVSLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPPDAAVRGAGAETVAAGTGPGVAGAAVDGAGLRDAARGGDDGGXXXXXXXXXXXXXXXXXXXXXGMEVAPQVGGHPRGNDADTAEESDTETVQRSCHDGSSPKEGGSPADDPGTEAPPGGQTLLXXXXXXXXXXXXXXXXXXXXXXXXXXX--------VDAAQGSNT------------------------ERTGRSGVGERRGSARLRNGGVGGRRRGERGRKDRGVACSTSPLPGEGQEAKDGGAPEKAVAAAGVDGAGRGDGGDAVREDASAAPVASPSAAAEEEASAATAGTVSVEDAAPAGRAGSKRRASTRRGVAASVAAASSXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------GGVASSSAAARVADALSAGKAGPVVSSQSLDDITEAVVAMSALVGEDRTVGQPGASQENANSVENHDTAA 1445          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9522.31119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHC6_9PHAE0.000e+079.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1G0_ECTSI0.000e+081.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 732..761
NoneNo IPR availableGENE3D2.20.28.140coord: 285..332
e-value: 1.2E-7
score: 33.4
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 291..315
e-value: 1.8E-5
score: 34.2
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 293..312
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 285..318
score: 8.784
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 289..314

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9522contigEcto-sp8_S_contig9522:2..7202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9522.31119.1mRNA_Ecto-sp8_S_contig9522.31119.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9522 2..7202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9522.31119.1 ID=prot_Ecto-sp8_S_contig9522.31119.1|Name=mRNA_Ecto-sp8_S_contig9522.31119.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=1147bp
EKFSSWKVGGRGLLGRGSAKKNGRLLVTGLGSAGRVGGPARASAPVLASP
GLYLDGARRGGGGRARSSRAGGGVSSPGDASDVFGMSDGDETERTMLDST
DCDSKAANRGHVSQSEADGSETDDGPADAATDGSSRKLPRRSSVRGAQAG
TGGGGGGGGRRQSRVSPGPSPRLAPKGAGGSGNGGITTPVNGTKRRGCSA
KNPMGEPESAARGSGGAAGGRGATTPASGYAADLSAGTTRVSKARARTGP
AAGGGCSGSSGEGGRRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTF
LNELAARKCVMCQSAAPRASRRPPRARGIRNGTDPAAHSERGMSSPPPRG
GAGIPPAEGAGGAASSGGRGAGGERGSSSAAAAAGDVSSPNGTWEGYEMG
RSTASSSAKSTRGPPPLAAPVSNRKSCPKAGTDSAGINRGVEPSPASGDS
HGKHQQGLLQGSGGIGGATPPGGDEPHRPPVVASLPGLASPGTSLFRRAA
AGAVPGSGVVDRAGGGASSSHGRASAGDTGGDSGGRNLATGEKVVGGRRG
GSDAGVKGGRAAATVNTRPGGGQGAGVVSLPRPCDEEEGSTAPAIRLFEA
VPSPSTSLLGRPPPDAAVGGAGAETVAAGTGPGVAGAAVDGAGLRDAARG
GDDGGRDLAAAGERDGDEEAGEGETGGMEVAPQVGVHPRGKDADTPEESD
TETVQRSCHDGSSPKEGGSPADDPETEAPPCGQTLLERAAEEEEKEQNEE
EEAEEEDASAGGEASTAAAAVVDAAQGSKTGERSASVADVRVGTAAVEMG
PLGAEGTGRSGVGERRGSARLRNGGVGGRRREQRRRKNGGVACSTSPLPG
EGQEAKDGGALEKAVAAAGVDGAGRRDGGDAVREDASAAPVASPSAADTV
SVEDAAPAGRAGSKRRASTRGGVAASVAAASSAVSAGRAGSKRRASTRGG
VAASVAAASSAVSAGRGGSKRRASTRGAAAASAPAAGGVASSSAAARVAD
AVSAGKAGPAVSSQSLDDMTEAVVAMSALVGEDRTVGQPGASQENADSVE
NHDTAAAAMILMAGSSSSARGGKRRQQQQQQRQQQQQRKVANGKGSSTDV
AKEAGAAVSEETRGGDKSKTGLVGTKRGLARDEDGGEGTGGRQGRRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf