prot_Ecto-sp8_S_contig95097.31087.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig95097.31087.1
Unique Nameprot_Ecto-sp8_S_contig95097.31087.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length67
Homology
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BLAST of mRNA_Ecto-sp8_S_contig95097.31087.1 vs. uniprot
Match: A0A6H5JCA5_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA5_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 5.430e-26
Identity = 59/82 (71.95%), Postives = 61/82 (74.39%), Query Frame = 0 
Query:    1 LRTRIHCQCHSCRKPYFGGLVSCEPAAPPADGEGGEAS---------------RALADIKPSELLCGKCSAGSGGASCSEHG 67
            L+   + QCHSCRKPYFGGLVSCEPAAPPA G GGEAS               RALADIKPSELLCGKCSAGSGGASCSEHG
Sbjct: 1388 LKKYSYYQCHSCRKPYFGGLVSCEPAAPPA-GRGGEASVGHGAGAAADAQAAERALADIKPSELLCGKCSAGSGGASCSEHG 1468
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BLAST of mRNA_Ecto-sp8_S_contig95097.31087.1 vs. uniprot
Match: D8LMH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH3_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 8.010e-22
Identity = 53/82 (64.63%), Postives = 56/82 (68.29%), Query Frame = 0 
Query:    1 LRTRIHCQCHSCRKPYFGGLVSCEPAAP------------PADGEGGEAS---RALADIKPSELLCGKCSAGSGGASCSEHG 67
            L+   + QCHSCRKPYFGGLVSCEPA P            P  G   +A    RALADIKPSELLCGKCSAGSGGASCSEHG
Sbjct:  415 LKKYSYYQCHSCRKPYFGGLVSCEPAPPXXXXXXXXASVGPGVGAAADAQAAERALADIKPSELLCGKCSAGSGGASCSEHG 496
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig95097.31087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JCA5_9PHAE5.430e-2671.95RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LMH3_ECTSI8.010e-2264.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig95097contigEcto-sp8_S_contig95097:7..252 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig95097.31087.1mRNA_Ecto-sp8_S_contig95097.31087.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig95097 7..252 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig95097.31087.1 ID=prot_Ecto-sp8_S_contig95097.31087.1|Name=mRNA_Ecto-sp8_S_contig95097.31087.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=67bp
LRTRIHCQCHSCRKPYFGGLVSCEPAAPPADGEGGEASRALADIKPSELL
CGKCSAGSGGASCSEHG
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