prot_Ecto-sp8_S_contig9498.31063.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9498.31063.1
Unique Nameprot_Ecto-sp8_S_contig9498.31063.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length285
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9498.31063.1 vs. uniprot
Match: D8LCW3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW3_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 1.630e-109
Identity = 251/271 (92.62%), Postives = 252/271 (92.99%), Query Frame = 0 
Query:    2 VIPACPLPRGTMYEWEKAASMGFTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAGSRNSVRQSSXXXVEAEASPAPSSTDQPSVGIRSSSGTXXXXXXXXXSTNGDSREKSMDGDLIGDETAALAARPREGSGETAAAAAKENLSPPLPVAAPSEGVVIRVLISGAHASFLHMRVFPSTTAGQVCRKIGEKLRQLPAEQNEYVLIAIYARPARNVSSLSYTGGGSTGSGHRHSAGVADRGAAVGGDEVDNDGAGDTAGGGRD 272
            VIPACPLPRGTMYEWEKAASMG TT XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXLAAGSRN  RQSSXXXVEAEASPAPSSTDQ SVGIRS    XXXXXXXX STNGDSREKS+DGDLIGDETAALAARPREGSG TAAAA KENLSPPLPVAAPSEGVVIRVLISGAHASFLHMRVFPSTTAGQVCRKIGEKLRQLPAEQNEYVLIAIYARPARNVSSLS TGGGSTG GHRHSAGVADRGA VGGDEVDN  AG TAGGGRD
Sbjct:   18 VIPACPLPRGTMYEWEKAASMGLTTXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXLAAGSRNGFRQSSXXXVEAEASPAPSSTDQRSVGIRSXXXXXXXXXXXXDSTNGDSREKSIDGDLIGDETAALAARPREGSGVTAAAA-KENLSPPLPVAAPSEGVVIRVLISGAHASFLHMRVFPSTTAGQVCRKIGEKLRQLPAEQNEYVLIAIYARPARNVSSLSDTGGGSTGPGHRHSAGVADRGATVGGDEVDNYSAGYTAGGGRD 287
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BLAST of mRNA_Ecto-sp8_S_contig9498.31063.1 vs. uniprot
Match: A0A6H5KG66_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG66_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 2.560e-73
Identity = 148/175 (84.57%), Postives = 150/175 (85.71%), Query Frame = 0 
Query:  113 TNGDSREKSMDGDLIGDETAALAARPREGSGETAAAAAKENL---SPPLPVAAPSEGVVIRVLISGAHASFLHMRVFPSTTAGQVCRKIGEKLRQLPAEQNEYVLIAIYARPARNVSSLSYTGGGSTGSGHRHSAGVADRGAAVGGDEVDNDGAGDTAGGGRDERERRHDGRRRR 284
            TNGDSREKSMDGDLIGDETAALAAR REGSG              SPPLPVAAPSEGVVIR+LISGAHASFLHMRVFPSTTAGQVCRKIGEKLRQLPAEQNEYVLIAIYARP+RNVS    TGGGS G GHRHSAGVADRGAAVGGDEVDNDGAG TAGG RDE E RHDGRRRR
Sbjct:   97 TNGDSREKSMDGDLIGDETAALAARTREGSGVAXXXXXXXXXXXSSPPLPVAAPSEGVVIRILISGAHASFLHMRVFPSTTAGQVCRKIGEKLRQLPAEQNEYVLIAIYARPSRNVSD---TGGGSNGPGHRHSAGVADRGAAVGGDEVDNDGAGYTAGGVRDEHELRHDGRRRR 268
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9498.31063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCW3_ECTSI1.630e-10992.62PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KG66_9PHAE2.560e-7384.57PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9498contigEcto-sp8_S_contig9498:5233..7150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9498.31063.1mRNA_Ecto-sp8_S_contig9498.31063.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9498 5233..7150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9498.31063.1 ID=prot_Ecto-sp8_S_contig9498.31063.1|Name=mRNA_Ecto-sp8_S_contig9498.31063.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=285bp
AVIPACPLPRGTMYEWEKAASMGFTTTATATSGGSSSHHSESAAAASPWA
ARDGRQRHPPPLAAGSRNSVRQSSSSSVEAEASPAPSSTDQPSVGIRSSS
GTSSVGGGGGGSTNGDSREKSMDGDLIGDETAALAARPREGSGETAAAAA
KENLSPPLPVAAPSEGVVIRVLISGAHASFLHMRVFPSTTAGQVCRKIGE
KLRQLPAEQNEYVLIAIYARPARNVSSLSYTGGGSTGSGHRHSAGVADRG
AAVGGDEVDNDGAGDTAGGGRDERERRHDGRRRR*
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