prot_Ecto-sp8_S_contig9498.31062.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9498.31062.1
Unique Nameprot_Ecto-sp8_S_contig9498.31062.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length378
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9498.31062.1 vs. uniprot
Match: D8LCW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW4_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 5.040e-60
Identity = 134/170 (78.82%), Postives = 139/170 (81.76%), Query Frame = 0 
Query:  150 MEKESLDVMRQQLAAVHQLRIDLQRKDS--QSLQLKVQEGESARDREGRLEAHCHLLEKRCSYLESTNGEYAERLGALDQESRSRVDSLKREKDDLKRQLRDSESELGAERRRFEGAAAAHRRELAAAVAEGADARGVAGGLKESLEEASAQANRRQGRWAEMEKLLTTQ 317
            MEKESLDVMRQQLAAVHQLRIDLQRKDS  QSLQLKVQEGESARDREGRLEAHCHLLEKRCS LESTNGEYAERLGALDQESRSRVDSL+REKDDL                           ELAAA+AEGADARG+AGGLKESLEEASAQANRRQGRWAEMEKL +T+
Sbjct:    1 MEKESLDVMRQQLAAVHQLRIDLQRKDSVIQSLQLKVQEGESARDREGRLEAHCHLLEKRCSCLESTNGEYAERLGALDQESRSRVDSLRREKDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXELAAALAEGADARGLAGGLKESLEEASAQANRRQGRWAEMEKLGSTE 170
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9498.31062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCW4_ECTSI5.040e-6078.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 226..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9498contigEcto-sp8_S_contig9498:3..5028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9498.31062.1mRNA_Ecto-sp8_S_contig9498.31062.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9498 3..5028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9498.31062.1 ID=prot_Ecto-sp8_S_contig9498.31062.1|Name=mRNA_Ecto-sp8_S_contig9498.31062.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=378bp
MSDIQSSLRRLQESIRGLSDASALVGATEAISVHSQERGNGDIYDEGGGG
VITSPVVARSSTRSSSSSTCQSRPASSTSKSSSTDKYHQHQHRQHFDGDD
DGDARSSHSGRRAKQPEEPEPSASFLSSIPRDLRESAEMRAARELEDLRM
EKESLDVMRQQLAAVHQLRIDLQRKDSQSLQLKVQEGESARDREGRLEAH
CHLLEKRCSYLESTNGEYAERLGALDQESRSRVDSLKREKDDLKRQLRDS
ESELGAERRRFEGAAAAHRRELAAAVAEGADARGVAGGLKESLEEASAQA
NRRQGRWAEMEKLLTTQLEDTRAGLARAERRAVATADIRRRDADAAAAAA
AALSAHLEAVCGGVGAGQGSTEAFVELS
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