prot_Ecto-sp8_S_contig9492.31055.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9492.31055.1
Unique Nameprot_Ecto-sp8_S_contig9492.31055.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length178
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9492.31055.1 vs. uniprot
Match: D8LNV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV4_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 7.230e-47
Identity = 158/177 (89.27%), Postives = 160/177 (90.40%), Query Frame = 0 
Query:    1 MTRLMLAKRCAAEGCNTHPTYGKPGTKTAKFCAKHAASEEMVNVIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPEGYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMTRTALKGWGDRRAWEELEDVDGDGAGACSPGADKGGQRQGDGEREEAVDRMISTDSLDNL 177
            MTRL+LAKRCAAEGCNTHPTYGKPGTKT  F AKHAASE MVNVI XXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MTRTALKGWGDRRAWEELEDVDG GAG CSPG DKGGQRQGDGE E A+DRMISTDSLDNL
Sbjct:    1 MTRLVLAKRCAAEGCNTHPTYGKPGTKTPDFFAKHAASE-MVNVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMTRTALKGWGDRRAWEELEDVDGHGAGTCSPGVDKGGQRQGDGEIE-AIDRMISTDSLDNL 175
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9492.31055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNV4_ECTSI7.230e-4789.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9492contigEcto-sp8_S_contig9492:172..705 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9492.31055.1mRNA_Ecto-sp8_S_contig9492.31055.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9492 172..1294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9492.31055.1 ID=prot_Ecto-sp8_S_contig9492.31055.1|Name=mRNA_Ecto-sp8_S_contig9492.31055.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=178bp
MTRLMLAKRCAAEGCNTHPTYGKPGTKTAKFCAKHAASEEMVNVIGKRCL
HEGCTKTAAYGAAGLRKREFCRSHAPEGYVNINYKSCRHAGCTSCAAFGE
WGSSIPEFCRLHAPERMTRTALKGWGDRRAWEELEDVDGDGAGACSPGAD
KGGQRQGDGEREEAVDRMISTDSLDNL*
back to top