prot_Ecto-sp8_S_contig9489.31050.1 (polypeptide) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: A0A6H5JYA8_9PHAE (Sm domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYA8_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.650e-27 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query: 65 PAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
PAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT
Sbjct: 64 PAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 114
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: A0A448Z717_9STRA (Sm domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z717_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.270e-22 Identity = 42/49 (85.71%), Postives = 46/49 (93.88%), Query Frame = 0
Query: 67 QTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
QTGG KRSPSDFLK+VLGRP +VKLNSGI+YRGVL CLDGY+NIAMEQT
Sbjct: 20 QTGGKKRSPSDFLKSVLGRPAIVKLNSGIEYRGVLACLDGYLNIAMEQT 68
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: B4FCE3_MAIZE (Sm-like protein LSM6A n=20 Tax=Poaceae TaxID=4479 RepID=B4FCE3_MAIZE) HSP 1 Score: 87.4 bits (215), Expect = 3.110e-20 Identity = 38/51 (74.51%), Postives = 44/51 (86.27%), Query Frame = 0
Query: 65 PAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
P GG ++PSDFLK++ GRPVVVKLNSG+DYRG+L CLDGYMNIAMEQT
Sbjct: 9 PGSGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQT 59
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: A0A7S2IZG2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IZG2_9EUKA) HSP 1 Score: 87.0 bits (214), Expect = 5.800e-20 Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 0
Query: 72 KRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
K +PSDFLKTVLGRPVVVKLNSG+DYRGVL CLDGYMNIAMEQT
Sbjct: 30 KSNPSDFLKTVLGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQT 73
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: A0A0G4IMQ5_PLABS (Sm domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IMQ5_PLABS) HSP 1 Score: 85.9 bits (211), Expect = 7.920e-20 Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0
Query: 72 KRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
KRSP+DFLKTVLGRPV VKLNSG++YRGVL CLDGYMNIAMEQT
Sbjct: 3 KRSPADFLKTVLGRPVYVKLNSGVEYRGVLACLDGYMNIAMEQT 46
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: I1I9Y0_BRADI (Sm domain-containing protein n=2 Tax=Poaceae TaxID=4479 RepID=I1I9Y0_BRADI) HSP 1 Score: 86.3 bits (212), Expect = 9.630e-20 Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query: 66 AQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
A +GG ++PSDFLK++ GRPVVVKLNSG+DYRGVL CLDGYMNIAMEQT
Sbjct: 13 AGSGGPVKTPSDFLKSIRGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQT 62
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: A0A7S3HE42_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE42_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.480e-19 Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 0
Query: 65 PAQTGG---GKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
PA G GKR+PSDF+K VLGRPV+VKLN+G DYRGVL CLDGYMNIAMEQT
Sbjct: 14 PAGAGAMSTGKRAPSDFIKQVLGRPVIVKLNNGTDYRGVLACLDGYMNIAMEQT 67
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: A0A0D9VGA6_9ORYZ (Sm domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9VGA6_9ORYZ) HSP 1 Score: 85.5 bits (210), Expect = 1.600e-19 Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
Query: 69 GGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
GG ++PSDFLK++ GRPVVVKLNSG+DYRG+L CLDGYMNIAMEQT
Sbjct: 14 GGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQT 60
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: I1IX44_BRADI (Sm domain-containing protein n=10 Tax=cellular organisms TaxID=131567 RepID=I1IX44_BRADI) HSP 1 Score: 85.5 bits (210), Expect = 1.880e-19 Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
Query: 69 GGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
GG ++PSDFLK++ GRPVVVKLNSG+DYRG+L CLDGYMNIAMEQT
Sbjct: 15 GGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQT 61
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Match: K3YB50_SETIT (Sm domain-containing protein n=7 Tax=Petrosaviidae TaxID=1437197 RepID=K3YB50_SETIT) HSP 1 Score: 85.5 bits (210), Expect = 1.880e-19 Identity = 37/47 (78.72%), Postives = 43/47 (91.49%), Query Frame = 0
Query: 69 GGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQT 115
GG ++PSDFLK++ GRPVVVKLNSG+DYRG+L CLDGYMNIAMEQT
Sbjct: 15 GGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQT 61 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9489.31050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp8_S_contig9489.31050.1 ID=prot_Ecto-sp8_S_contig9489.31050.1|Name=mRNA_Ecto-sp8_S_contig9489.31050.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=115bpback to top |