prot_Ecto-sp8_S_contig94796.31027.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94796.31027.1
Unique Nameprot_Ecto-sp8_S_contig94796.31027.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length88
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94796.31027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 49..84
e-value: 7.2E-7
score: 29.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..88
e-value: 4.5E-22
score: 80.3
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 1..21
e-value: 1.1
score: 10.1
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 1..87
NoneNo IPR availablePANTHERPTHR27008:SF206coord: 1..87
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 1..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94796contigEcto-sp8_S_contig94796:143..586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94796.31027.1mRNA_Ecto-sp8_S_contig94796.31027.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94796 143..586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94796.31027.1 ID=prot_Ecto-sp8_S_contig94796.31027.1|Name=mRNA_Ecto-sp8_S_contig94796.31027.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=88bp
LKKLNLEKNSIGGALPTSLAECKALEDLNISNNQLMGPLLHIPWANLENL
EHLLLGNNKLEGTLPASFGSLKALVSLDCSKNQLAGEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025875Leu-rich_rpt_4
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt