prot_Ecto-sp8_S_contig9479.31026.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9479.31026.1
Unique Nameprot_Ecto-sp8_S_contig9479.31026.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: D7FSF7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF7_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.150e-27
Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 0
Query:   16 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQVKLRVFLSLPSG 78
            MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQ +  ++  LPSG
Sbjct:    1 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQERENIYF-LPSG 62          
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK)

HSP 1 Score: 103 bits (258), Expect = 4.300e-24
Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    5 NRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQVKLRVFLSLPS 77
             RKCTDILFLL+L A W AMT LGF+V G+IPND LEPGNP+RL+NGIDY G ICGV + V  K +++  LPS
Sbjct:   30 KRKCTDILFLLLLIACWVAMTFLGFVVCGVIPNDNLEPGNPQRLINGIDYNGHICGVDSAVSDKSKIYY-LPS 101          
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK)

HSP 1 Score: 99.0 bits (245), Expect = 2.490e-22
Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    5 NRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQVKLRVF 72
             RKCTDILFLL++ A W AMT LGF+VTG IP+D L+ GNP+RL+NGIDYEG ICGV + V+ K +++
Sbjct:   82 KRKCTDILFLLLIIACWVAMTFLGFVVTGAIPSDTLDAGNPERLINGIDYEGNICGVDSGVKSKSKIY 149          
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: A0A7S3H7K4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7K4_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 9.400e-20
Identity = 40/64 (62.50%), Postives = 46/64 (71.88%), Query Frame = 0
Query:    2 QNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTV 65
                R CTD+L LL+L A W  MT+LG IVTGLI ND L  G+P+RL+N IDY GRICGVGT V
Sbjct:    2 DKKRRCCTDLLMLLLLIAVWITMTVLGLIVTGLIENDNLTAGDPRRLINPIDYNGRICGVGTGV 65          
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: A0A7S2Y2B5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B5_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.710e-19
Identity = 41/74 (55.41%), Postives = 57/74 (77.03%), Query Frame = 0
Query:    5 NRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQVKLRVFLSLPSG 78
            NRKCTD+L +L+L A W A T+LGFIV G+I N+ LE GNP RL+NG+DY+GR+CG+ + V+ +  ++  LPSG
Sbjct:    5 NRKCTDVLCMLLLIAVWFATTILGFIVCGVIENENLEAGNPWRLVNGVDYDGRVCGIDSGVKNEENIYY-LPSG 77          
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: A0A835Z9G9_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G9_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 3.410e-17
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    5 NRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQVKLRVFLSLPSG 78
            +R+CTD+LF L+L A+WAAMT LG +V G+I +   E GNPKRL+NGID +G ICGV   V   L  F  +PSG
Sbjct:   30 HRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAV-ADLDKFYPVPSG 102          
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: B8C1T3_THAPS (Choline transporter-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1T3_THAPS)

HSP 1 Score: 77.4 bits (189), Expect = 9.280e-15
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    3 NGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQVKLRV-FLSLPSGFP 80
               R CTD+LFLL+L  AW AMT +G   TGLI ++ ++ G+P+RL+NG+DY   ICGV T  Q  L    ++LP  +P
Sbjct:    2 ESRRTCTDVLFLLLLVCAWIAMTGVGLAATGLIKSEVIKKGDPRRLINGLDYHANICGV-TNYQTPLGADVINLPKAYP 79          
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.880e-13
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    1 VQNG-NRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQVKLRVF 72
            ++ G +R+CTD+LF+L+L  AW AMT LG         DG+  GNP  LLNGIDY+GRICGV   V+ K +++
Sbjct:   24 IEGGADRRCTDVLFMLVLILAWLAMTYLGV--------DGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLY 88          
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.900e-13
Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = 0
Query:    1 VQNG-NRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQVKLRVF 72
            ++ G +R+CTD+LF+L+L  AW AMT LG         DG+  GNP  LLNGIDY+GRICGV   V+ K +++
Sbjct:    8 IEGGADRRCTDVLFMLVLILAWLAMTYLGV--------DGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLY 72          
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.100e-11
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    5 NRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQVKLRVF 72
             RKCTD LF+L+L   W AMT++G           ++ GNP RL+NGIDY+GRICGV   V+   +++
Sbjct:   20 KRKCTDTLFMLVLVCCWIAMTVIGI--------KAVQTGNPDRLVNGIDYQGRICGVDAGVETLTKMY 79          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9479.31026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF7_ECTSI1.150e-2787.30Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S3Y650_HETAK4.300e-2465.75Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S3Y6D2_HETAK2.490e-2263.24Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S3H7K4_9STRA9.400e-2062.50Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2Y2B5_9STRA1.710e-1955.41Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A835Z9G9_9STRA3.410e-1755.41Choline transporter-like protein n=1 Tax=Tribonema... [more]
B8C1T3_THAPS9.280e-1546.84Choline transporter-like protein (Fragment) n=1 Ta... [more]
D8LIJ7_ECTSI2.880e-1349.32Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5L007_9PHAE2.900e-1349.32Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A835Z6J7_9STRA3.100e-1145.59Choline transporter-like protein n=1 Tax=Tribonema... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..82
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9479contigEcto-sp8_S_contig9479:6451..6699 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9479.31026.1mRNA_Ecto-sp8_S_contig9479.31026.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9479 6451..6699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9479.31026.1 ID=prot_Ecto-sp8_S_contig9479.31026.1|Name=mRNA_Ecto-sp8_S_contig9479.31026.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=83bp
VQNGNRKCTDILFLLMLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLN
GIDYEGRICGVGTTVQVKLRVFLSLPSGFPKR*
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