prot_Ecto-sp8_S_contig94761.31022.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94761.31022.1
Unique Nameprot_Ecto-sp8_S_contig94761.31022.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length197
Homology
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: UPI000C756D20 (60S ribosomal protein L3-like n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C756D20)

HSP 1 Score: 350 bits (897), Expect = 3.080e-118
Identity = 168/197 (85.28%), Postives = 183/197 (92.89%), Query Frame = 0
Query:    1 RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFARNH 197
            RKFEAPRHGSKGFLPKKRSK  +G+ K FPKDD SKPVHLTCFMGYKAGMTHIVR+VDRPGSK NKKE+VE CTIIETPP+V +G+VGYIETPRGLRALKT+WAEHIGEE KRRFYKNWSQSKKKAFTKSCTKWADD GKK IEKEL+Q+KKYCT +R+IVHTQMKIL RRQKKAHIMEVQLNGGS++DKV+FAR H
Sbjct:    4 RKFEAPRHGSKGFLPKKRSKTFRGRVKCFPKDDSSKPVHLTCFMGYKAGMTHIVRDVDRPGSKVNKKEVVEACTIIETPPVVCVGMVGYIETPRGLRALKTVWAEHIGEECKRRFYKNWSQSKKKAFTKSCTKWADDAGKKMIEKELNQIKKYCTVVRVIVHTQMKILHRRQKKAHIMEVQLNGGSISDKVNFAREH 200          
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: V9P2R7_9MAXI (Ribosomal protein L3 n=2 Tax=Pseudodiaptomus TaxID=163475 RepID=V9P2R7_9MAXI)

HSP 1 Score: 349 bits (896), Expect = 4.820e-118
Identity = 167/197 (84.77%), Postives = 184/197 (93.40%), Query Frame = 0
Query:    1 RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFARNH 197
            RKFEAPRHGSKGFLPKKRSKR++GK KAFPKDDPSKPVHLTCF+GYKAG THIVREVDRPGSK NKKE+VE  TIIETPPM+ +GVVGYI+TPRGLRALKT+WAEHIGEE KRRFYKNWS+SKKKAFTK CTKW DDLGKKEIEK+L+Q+KKYCT +R+I HTQMKIL RRQKKAHIMEVQ+NGGS+ADKV+FAR H
Sbjct:    4 RKFEAPRHGSKGFLPKKRSKRYRGKVKAFPKDDPSKPVHLTCFLGYKAGTTHIVREVDRPGSKVNKKEVVEAVTIIETPPMMCVGVVGYIQTPRGLRALKTVWAEHIGEECKRRFYKNWSKSKKKAFTKPCTKWNDDLGKKEIEKDLNQIKKYCTVVRVIAHTQMKILHRRQKKAHIMEVQVNGGSIADKVNFAREH 200          
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: A0A553NT51_TIGCA (Uncharacterized protein (Fragment) n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NT51_TIGCA)

HSP 1 Score: 345 bits (886), Expect = 1.990e-116
Identity = 165/197 (83.76%), Postives = 181/197 (91.88%), Query Frame = 0
Query:    1 RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFARNH 197
            RKF APRHGS GF PKKRSK H+GK KAFPKDDPSKPVHLTCF+GYKAGMTH+VRE DRPGSK NK+EIVE  TIIETPPM+A+GVVGYIETPRGLRALKT+WAEHI EE KRRFYKNWS+SKKKAFTK+C KW +DLGKKEIEKEL+Q+KKYC+ +RII HTQ K+LRRRQKKAHIME+QLNGGSVADKVDFARNH
Sbjct:    3 RKFSAPRHGSMGFYPKKRSKTHRGKAKAFPKDDPSKPVHLTCFLGYKAGMTHVVRESDRPGSKMNKREIVEAVTIIETPPMIAVGVVGYIETPRGLRALKTVWAEHISEECKRRFYKNWSKSKKKAFTKACKKWQEDLGKKEIEKELNQIKKYCSVVRIICHTQQKLLRRRQKKAHIMEIQLNGGSVADKVDFARNH 199          
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: R9TI11_ACAPC (Ribosomal protein L3 n=1 Tax=Acartia pacifica TaxID=335913 RepID=R9TI11_ACAPC)

HSP 1 Score: 339 bits (869), Expect = 5.460e-114
Identity = 165/195 (84.62%), Postives = 184/195 (94.36%), Query Frame = 0
Query:    1 RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFAR 195
            RKFEAPRHGSKGFLPKKRS+ ++G  KAFPKDD SKPVH+TCFMGYKAGMTHIVRE+DRPGSK+NKKE+VE  TIIETPP+V IGV GYIETPRGLRALKT+WA+HIGEEA+RRFYKNWSQS+KKAFTKS TKW DDLGKKEIEK+L+QMKKYC+ IR+IVHTQMKILRRRQKKAHIMEVQLNGG+VA+KVD+AR
Sbjct:    4 RKFEAPRHGSKGFLPKKRSRTYRGCVKAFPKDDASKPVHMTCFMGYKAGMTHIVREMDRPGSKANKKEVVEAVTIIETPPVVVIGVTGYIETPRGLRALKTVWAQHIGEEARRRFYKNWSQSEKKAFTKSSTKWDDDLGKKEIEKDLAQMKKYCSVIRVIVHTQMKILRRRQKKAHIMEVQLNGGTVAEKVDWAR 198          
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: UPI000D73403F (LOW QUALITY PROTEIN: 60S ribosomal protein L3-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D73403F)

HSP 1 Score: 322 bits (826), Expect = 2.120e-107
Identity = 152/197 (77.16%), Postives = 174/197 (88.32%), Query Frame = 0
Query:    1 RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFARNH 197
            RKF APRHGSKGFLPKKRSKRH+GK KAFPKDDPSKPVHLT F+GYKAGMTH+VREVDRPGSK NKKE+VE  TIIETPPMV +GVVGYIETPRG+R  KT+WAEH+ EE KRRFYKNWS+SKKKAFTK   KW D+ GKK+IE + ++MKKYCT IR+I HTQ K+LR+RQKKAHIME+QLNGGS+ DKV++A+ H
Sbjct:    4 RKFSAPRHGSKGFLPKKRSKRHRGKVKAFPKDDPSKPVHLTAFLGYKAGMTHVVREVDRPGSKVNKKEVVEAVTIIETPPMVCVGVVGYIETPRGMRTFKTVWAEHLSEECKRRFYKNWSRSKKKAFTKYAKKWQDESGKKDIENDFNKMKKYCTVIRVIAHTQSKLLRQRQKKAHIMEIQLNGGSIPDKVEWAKAH 200          
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: A0A8B7YMH0_ACAPL (60S ribosomal protein L3-like n=3 Tax=Asteroidea TaxID=7588 RepID=A0A8B7YMH0_ACAPL)

HSP 1 Score: 322 bits (824), Expect = 9.900e-107
Identity = 152/197 (77.16%), Postives = 174/197 (88.32%), Query Frame = 0
Query:    1 RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFARNH 197
            RKF APRHGS GFLP+KRS+RH+GK KAFPKDDPSKPVHLT F+GYKAGMTHIVR VDRPGSK NKKE+VEG TI+ETPP+V +GVVGYIETPRG+R+LK +WAEH+ +E KRRFYKNW +SKKKAFTK+  KWADD GK EIEK+   MKKYC  IR+IVHTQMK++ +RQKKAHIMEVQLNGGS+ADKVD+AR H
Sbjct:   29 RKFSAPRHGSLGFLPRKRSRRHRGKVKAFPKDDPSKPVHLTAFLGYKAGMTHIVRTVDRPGSKMNKKEVVEGVTIVETPPVVVVGVVGYIETPRGMRSLKVVWAEHLSDECKRRFYKNWYRSKKKAFTKASKKWADDAGKAEIEKDFKTMKKYCKVIRVIVHTQMKLMNQRQKKAHIMEVQLNGGSIADKVDWAREH 225          
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: A0A0K2V4R4_LEPSM (60S ribosomal protein L3like [Apis florea] (Fragment) n=5 Tax=Caligidae TaxID=72034 RepID=A0A0K2V4R4_LEPSM)

HSP 1 Score: 320 bits (819), Expect = 1.510e-106
Identity = 151/186 (81.18%), Postives = 168/186 (90.32%), Query Frame = 0
Query:   12 GFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFARNH 197
            GF PKKRSKRH+GK KAFPKDDPSKPVHLTCF+GYKAGMTH+VRE DRPGSK NKKEIVE  TI+ETPPMVAIGVVGYIETPRGLRALKT+WAEHIGEEAKRRFYKNWS+SKKKAFTK+C KW DDLGKKEIE +L Q+ KY + +R+I HTQ K+L+RRQKKAHIME+QLNGGS+ DK+ FAR H
Sbjct:    2 GFYPKKRSKRHRGKAKAFPKDDPSKPVHLTCFLGYKAGMTHVVREADRPGSKINKKEIVEAVTIVETPPMVAIGVVGYIETPRGLRALKTVWAEHIGEEAKRRFYKNWSKSKKKAFTKACKKWEDDLGKKEIENDLKQIAKYASAVRLICHTQQKLLKRRQKKAHIMEIQLNGGSIPDKISFAREH 187          
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: A0A7R8WRA1_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WRA1_9CRUS)

HSP 1 Score: 312 bits (799), Expect = 4.000e-106
Identity = 146/197 (74.11%), Postives = 175/197 (88.83%), Query Frame = 0
Query:    1 RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFARNH 197
            RKFEAPRHGS GF PKKRS+RH+GK KAFPKDD SKPVHLT F+GYKAGMTH+VRE DRPGSK +KKEIVE  T++ETPPMV +G++GYIETPRG+RALKT+WAEHI E+ KRRFYKNW +SKKKAFTK+  KWAD+ GK++IEK+L+ MKKYC TIR+I HTQMK+LR+RQKK+H+ME+Q+NGGSV  KVD+A+ H
Sbjct:    3 RKFEAPRHGSMGFYPKKRSRRHRGKVKAFPKDDKSKPVHLTAFIGYKAGMTHVVRECDRPGSKVHKKEIVEAVTVLETPPMVIVGIIGYIETPRGMRALKTVWAEHISEDCKRRFYKNWYKSKKKAFTKASKKWADEKGKQQIEKDLNIMKKYCKTIRVIAHTQMKLLRQRQKKSHVMEIQVNGGSVPAKVDWAKEH 199          
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: R7VDG0_CAPTE (Uncharacterized protein n=2 Tax=Capitella teleta TaxID=283909 RepID=R7VDG0_CAPTE)

HSP 1 Score: 318 bits (815), Expect = 1.390e-105
Identity = 148/197 (75.13%), Postives = 178/197 (90.36%), Query Frame = 0
Query:    1 RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFARNH 197
            RKF APRHGS GFLP+KRS RH+GK KAFPKDDPSKPVHLT F+ YKAGMTH+VREVDRPGSK++KKE+V+  TI+E PPM+AIGV+GYIETPRGLRALKT+WAEH+ EE +RRFYKNW +SKKKAFTK+  KW D++GKKEIEK+L++MKKYC+ IR+I HTQMK+L++RQKKAHIME+Q+NGG+VA KVD+AR H
Sbjct:   14 RKFSAPRHGSLGFLPRKRSTRHRGKVKAFPKDDPSKPVHLTSFLAYKAGMTHVVREVDRPGSKAHKKEVVDAVTILEAPPMIAIGVIGYIETPRGLRALKTVWAEHLSEECRRRFYKNWYRSKKKAFTKASKKWQDEVGKKEIEKDLAKMKKYCSVIRVIAHTQMKLLKKRQKKAHIMEIQVNGGTVAQKVDWAREH 210          
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Match: A0A7M7RDC3_STRPU (Uncharacterized protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7RDC3_STRPU)

HSP 1 Score: 318 bits (814), Expect = 1.440e-105
Identity = 147/195 (75.38%), Postives = 176/195 (90.26%), Query Frame = 0
Query:    1 RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGMTHIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALKTIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQMKKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFAR 195
            RKF APRHGS GFLP+KRS+RH+GK KAFPKDD SKPVHLTCF+GYKAGMTHIVR+VDRPGSK NKKE+VE  +I+ETPPM+ +G+VGYIETP GLRALKT+WAEH+ +E KRRFYKNW +SKKKAFTKS  KWAD++GKKEIEK+L+ MKKYCT IR+I HTQMK++ +RQKKAH+ME+QLNGGS+ DK+++AR
Sbjct:    4 RKFSAPRHGSLGFLPRKRSRRHRGKAKAFPKDDKSKPVHLTCFLGYKAGMTHIVRDVDRPGSKVNKKEVVEAVSILETPPMIIVGLVGYIETPSGLRALKTVWAEHLSDECKRRFYKNWYRSKKKAFTKSSKKWADEMGKKEIEKDLNIMKKYCTVIRVIAHTQMKLMNQRQKKAHVMEIQLNGGSIGDKIEWAR 198          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94761.31022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C756D203.080e-11885.2860S ribosomal protein L3-like n=2 Tax=Eurytemora a... [more]
V9P2R7_9MAXI4.820e-11884.77Ribosomal protein L3 n=2 Tax=Pseudodiaptomus TaxID... [more]
A0A553NT51_TIGCA1.990e-11683.76Uncharacterized protein (Fragment) n=1 Tax=Tigriop... [more]
R9TI11_ACAPC5.460e-11484.62Ribosomal protein L3 n=1 Tax=Acartia pacifica TaxI... [more]
UPI000D73403F2.120e-10777.16LOW QUALITY PROTEIN: 60S ribosomal protein L3-like... [more]
A0A8B7YMH0_ACAPL9.900e-10777.1660S ribosomal protein L3-like n=3 Tax=Asteroidea T... [more]
A0A0K2V4R4_LEPSM1.510e-10681.1860S ribosomal protein L3like [Apis florea] (Fragme... [more]
A0A7R8WRA1_9CRUS4.000e-10674.11Hypothetical protein (Fragment) n=1 Tax=Cyprideis ... [more]
R7VDG0_CAPTE1.390e-10575.13Uncharacterized protein n=2 Tax=Capitella teleta T... [more]
A0A7M7RDC3_STRPU1.440e-10575.38Uncharacterized protein n=2 Tax=Echinacea TaxID=76... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000597Ribosomal protein L3PFAMPF00297Ribosomal_L3coord: 1..197
e-value: 2.1E-87
score: 293.5
NoneNo IPR availableGENE3D4.10.960.10coord: 1..84
e-value: 1.0E-22
score: 82.4
NoneNo IPR availableGENE3D3.30.1430.10coord: 85..197
e-value: 4.3E-57
score: 193.7
NoneNo IPR availablePANTHERPTHR1136360S RIBOSOMAL PROTEIN L3-RELATEDcoord: 1..196
NoneNo IPR availablePANTHERPTHR11363:SF10coord: 1..196
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 1..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94761contigEcto-sp8_S_contig94761:2..592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94761.31022.1mRNA_Ecto-sp8_S_contig94761.31022.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94761 2..592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94761.31022.1 ID=prot_Ecto-sp8_S_contig94761.31022.1|Name=mRNA_Ecto-sp8_S_contig94761.31022.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=197bp
RKFEAPRHGSKGFLPKKRSKRHKGKPKAFPKDDPSKPVHLTCFMGYKAGM
THIVREVDRPGSKSNKKEIVEGCTIIETPPMVAIGVVGYIETPRGLRALK
TIWAEHIGEEAKRRFYKNWSQSKKKAFTKSCTKWADDLGKKEIEKELSQM
KKYCTTIRIIVHTQMKILRRRQKKAHIMEVQLNGGSVADKVDFARNH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000597Ribosomal_L3
IPR009000Transl_B-barrel_sf