prot_Ecto-sp8_S_contig947.31012.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig947.31012.1
Unique Nameprot_Ecto-sp8_S_contig947.31012.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length144
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig947.31012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..67
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 67..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig947contigEcto-sp8_S_contig947:15181..15612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig947.31012.1mRNA_Ecto-sp8_S_contig947.31012.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig947 15181..15612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig947.31012.1 ID=prot_Ecto-sp8_S_contig947.31012.1|Name=mRNA_Ecto-sp8_S_contig947.31012.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=144bp
MGTAALRGNLKPPYGARWEANGLLPTHAMVVFRGLFYFFLCGIFADCCVL
RTWLGFRQVHVARSSRHLLLGCMLFAPIHGGVLASGEKSDTTPVTTFNKN
RHVGSFTWDHRLLLHTSILLESIVFYFSQRGTNRHIRDSGRKIR
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