prot_Ecto-sp8_S_contig94640.31005.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94640.31005.1
Unique Nameprot_Ecto-sp8_S_contig94640.31005.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length187
Homology
BLAST of mRNA_Ecto-sp8_S_contig94640.31005.1 vs. uniprot
Match: UPI000C758266 (glutenin, high molecular weight subunit PW212-like isoform X1 n=3 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C758266)

HSP 1 Score: 136 bits (343), Expect = 7.920e-34
Identity = 78/176 (44.32%), Postives = 97/176 (55.11%), Query Frame = 0
Query:    2 GMPVTKPQSIGQIIPGMGGDG---GLTLAALSNMGFGSSKENHVDEITVDDFFDAIIEALDNDKDVFEYNKEINSDSWFGKQSFGGLVDGFSFIDPSKFLNQIYGSPYGLANAQAMYGMQYGISQDKFKQTDTH---------------NMMTGFQSPYGS-PYGQSPYGPPSPYG 158
            G+   +P   G + PG G  G      + A+  +G G SKE H DEITVDD  D +I ALDND DVFE N EINSD WFGKQ FGG  + FS IDP +F++QIYG+P+GL+ A+  YG  YG+   KF+                    +M  G + PYG   YG    G P PYG
Sbjct:  207 GLRPGRPVQYGSVRPGFGYQGIPGPAAIGAIEQIGVGKSKEYHTDEITVDDLMDTLIYALDNDNDVFERNTEINSDPWFGKQVFGGNQNDFSLIDPYRFIDQIYGNPFGLSQAKLNYGELYGLEDSKFRNPSKGFEYDYSLRPQYGSGPSMYGGGKGPYGDGSYGGGQVGRPGPYG 382          
BLAST of mRNA_Ecto-sp8_S_contig94640.31005.1 vs. uniprot
Match: UPI001AEA2061 (glycine-rich cell wall structural protein 1.8-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AEA2061)

HSP 1 Score: 94.0 bits (232), Expect = 5.560e-19
Identity = 60/158 (37.97%), Postives = 82/158 (51.90%), Query Frame = 0
Query:    8 PQSIGQIIPGM-------GGDGGLTLAALSNMG---FGSSKENHVDEITVDDFFDAIIEALDNDKDVFEYNKEINSDSWFGKQSFGGLVDGFSFIDPSKFLNQIYGSPY----GLANAQAMYGMQYGISQDKFKQTDTHNMMTGFQSPYGSPYGQSPY 151
            P  IGQ++PG+       GG G          G   +  S++ HV+EITVDD  +++IEAL  D DV+ Y+K + SD  F K  FGG+VD F++IDP+ FL+ IYG+P     G     + Y    G  QD        N+  G     G+ YG SPY
Sbjct:   93 PTEIGQVVPGLIAPPPLYGGYGDEYKGDFPGQGLHDYDDSEDKHVEEITVDDLMNSLIEALSADDDVYSYDKVMTSDPLFKKDEFGGVVDSFNYIDPNYFLDAIYGTPKTYGGGFRQGHSAYSGYGGGYQDSAYGAVNGNLGYG-----GNKYGHSPY 245          
BLAST of mRNA_Ecto-sp8_S_contig94640.31005.1 vs. uniprot
Match: A0A7R8CT89_LEPSM ((salmon louse) hypothetical protein n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8CT89_LEPSM)

HSP 1 Score: 94.0 bits (232), Expect = 5.590e-19
Identity = 60/158 (37.97%), Postives = 82/158 (51.90%), Query Frame = 0
Query:    8 PQSIGQIIPGM-------GGDGGLTLAALSNMG---FGSSKENHVDEITVDDFFDAIIEALDNDKDVFEYNKEINSDSWFGKQSFGGLVDGFSFIDPSKFLNQIYGSPY----GLANAQAMYGMQYGISQDKFKQTDTHNMMTGFQSPYGSPYGQSPY 151
            P  IGQ++PG+       GG G          G   +  S++ HV+EITVDD  +++IEAL  D DV+ Y+K + SD  F K  FGG+VD F++IDP+ FL+ IYG+P     G     + Y    G  QD        N+  G     G+ YG SPY
Sbjct:  189 PTEIGQVVPGLIAPPPLYGGYGDEYKGDFPGQGLHDYDDSEDKHVEEITVDDLMNSLIEALSADDDVYSYDKVMTSDPLFKKDEFGGVVDSFNYIDPNYFLDAIYGTPKTYGGGFRQGHSAYSGYGGGYQDSAYGAVNGNLGYG-----GNKYGHSPY 341          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94640.31005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI000C7582667.920e-3444.32glutenin, high molecular weight subunit PW212-like... [more]
UPI001AEA20615.560e-1937.97glycine-rich cell wall structural protein 1.8-like... [more]
A0A7R8CT89_LEPSM5.590e-1937.97(salmon louse) hypothetical protein n=1 Tax=Lepeop... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94640contigEcto-sp8_S_contig94640:25..585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94640.31005.1mRNA_Ecto-sp8_S_contig94640.31005.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94640 25..585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94640.31005.1 ID=prot_Ecto-sp8_S_contig94640.31005.1|Name=mRNA_Ecto-sp8_S_contig94640.31005.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=187bp
MGMPVTKPQSIGQIIPGMGGDGGLTLAALSNMGFGSSKENHVDEITVDDF
FDAIIEALDNDKDVFEYNKEINSDSWFGKQSFGGLVDGFSFIDPSKFLNQ
IYGSPYGLANAQAMYGMQYGISQDKFKQTDTHNMMTGFQSPYGSPYGQSP
YGPPSPYGASNHYGPPTPPSYAPPQYNPHGPPPPAQP
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