prot_Ecto-sp8_S_contig94639.31003.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94639.31003.1
Unique Nameprot_Ecto-sp8_S_contig94639.31003.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length155
Homology
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A7X2FWV6_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7X2FWV6_9PROT)

HSP 1 Score: 275 bits (702), Expect = 2.010e-92
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0
Query:    1 AVTIALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNRLQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKKMPTLKLNFK 154
            AVTIALIDYQRLLRESKGMQDAAKQINAKGKELE VIKNRQKELQAAETELKRQRTVLSPEAFQKRR DFEKDVAEFNRLQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLA LDKKMPTLKLNFK
Sbjct:   32 AVTIALIDYQRLLRESKGMQDAAKQINAKGKELETVIKNRQKELQAAETELKRQRTVLSPEAFQKRRADFEKDVAEFNRLQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAELDKKMPTLKLNFK 185          
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A7X0EBC7_9PROT (Skp family chaperone for outer membrane proteins n=2 Tax=Azospirillaceae TaxID=2829815 RepID=A0A7X0EBC7_9PROT)

HSP 1 Score: 88.6 bits (218), Expect = 4.160e-19
Identity = 56/153 (36.60%), Postives = 91/153 (59.48%), Query Frame = 0
Query:    3 TIALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNR-LQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNV-YMAAEAMDITDNVLAALDKKMPTLKLNF 153
            TIA++D Q LL +   MQ   +Q + + ++ +  +  +++ L+ AE EL  QRTVL  EAF  +R DFE+ VA+  R +Q+R      A ++ S K  D  + +   E+A+ N  TL++ RSN+ YMA +A+DIT+ VL  L+  +P + +N 
Sbjct:   31 TIAVVDVQFLLEKCSAMQSVKQQDSVQTQKFQAELSQQEQLLRQAEKELASQRTVLGQEAFDAKRKDFEQQVADMQRRMQERRRQLDNAFSEASAKLRDSMVRVVG-EVARENGFTLVIPRSNIIYMADDALDITNTVLLRLNATLPQITVNI 182          
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A7V2T7Q0_9PROT (OmpH family outer membrane protein n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2T7Q0_9PROT)

HSP 1 Score: 88.2 bits (217), Expect = 1.150e-18
Identity = 48/148 (32.43%), Postives = 89/148 (60.14%), Query Frame = 0
Query:    4 IALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNRLQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKKMPTLKL 151
            +A+++YQRLLRE+K  +   ++I A+ +  +  IK +++EL   E E+ RQR++LSPEAF K+R +FE++ A   R  +    Q+ AA+  +       I     E+A+     L+L  + V + +  +D+T+ VLA +D ++P++++
Sbjct:   59 VAVVNYQRLLREAKAARQIREEIEARRRRYQEEIKKKEQELLEKEREITRQRSLLSPEAFAKKRREFEQEAAAVQRQVQERRRQLDAASASAYAEVRNAIIAVVGELAEERGFNLVLPSTAVLLFSPRLDLTEEVLAGIDARLPSVEV 206          
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A357V1R4_9PROT (Uncharacterized protein n=5 Tax=Rhodospirillales TaxID=204441 RepID=A0A357V1R4_9PROT)

HSP 1 Score: 87.8 bits (216), Expect = 1.200e-18
Identity = 51/151 (33.77%), Postives = 88/151 (58.28%), Query Frame = 0
Query:    1 AVTIALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNRLQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKKMPTLKL 151
            A  +A++D QR+LRE+K M++   Q++   K  +  I+  Q +L+ A  EL+R+RT+LSP+AF + R  F++ VAE  RL +    Q+  AN +++    +       E+A   +  LI R+S   +    +++T  VLA LDK++P +K+
Sbjct:   46 AAKVAVLDVQRILREAKAMKNIRDQVSQLRKSYQEEIEKMQGDLRTANEELRRKRTILSPDAFDEERRKFDQKVAEVQRLVQSRNQQLDRANAEAVIEVQKVYNAIVLELANERSYGLIFRKSATIVVHPPIEVTPEVLARLDKRLPAVKV 196          
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A212R7B5_9PROT (Periplasmic chaperone for outer membrane proteins Skp n=2 Tax=Arboricoccus pini TaxID=1963835 RepID=A0A212R7B5_9PROT)

HSP 1 Score: 86.3 bits (212), Expect = 3.540e-18
Identity = 48/147 (32.65%), Postives = 84/147 (57.14%), Query Frame = 0
Query:    5 ALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNRLQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKKMPTLKL 151
            A++D+QRL+ ++K  +D   Q+ A+ K     +   ++ L   + E+ RQR+VL+PE + ++R DFE+ V +  RL +    Q+ A   ++L    Q +     E+AK     L+L  S V + A  +D+T +VLA LDKK+P +++
Sbjct:   37 AVVDFQRLMSDAKAAKDINDQVEARRKSYLDELSAEEQHLYDTDKEIARQRSVLAPEVYTQKRRDFEQRVQQAQRLSQERRQQLEAVRARALGTVRQAVIEVVDELAKQRGFNLVLPSSTVLLFAPDLDLTQDVLAILDKKLPHVEV 183          
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A7C2A7S1_9PROT (OmpH family outer membrane protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C2A7S1_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 3.460e-17
Identity = 51/144 (35.42%), Postives = 82/144 (56.94%), Query Frame = 0
Query:    2 VTIALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNRLQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKK 145
            V +A+ID   + R++K +Q+   QIN   K  +  IK  + +L+ A  EL RQR +LSPEAF + R  FE+ +    R  +     +  A   S++A ++++ I    IAK   ++LILR     +AA+A+ IT++ LA LD+K
Sbjct:   40 VNVAIIDVNEIRRKAKVVQNIRDQINKYRKIFQAEIKKEEDKLRKANQELSRQRAILSPEAFAEERRKFEQRLVGVQRKVRERRRSLDRAFSTSMRAVEKRLSIIVTGIAKIKKLSLILRLDQTVLAAQALSITNDALAVLDRK 183          
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A3M0XRE6_9PROT (OmpH family outer membrane protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0XRE6_9PROT)

HSP 1 Score: 82.4 bits (202), Expect = 1.120e-16
Identity = 46/150 (30.67%), Postives = 93/150 (62.00%), Query Frame = 0
Query:    1 AVTIALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNRL---QKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKKMP 147
            A  IA+ID Q+++RES+ ++  AK+++A+  +++  ++ ++  L+AA+ EL RQR++LS EAF ++R + E+ V    R    Q+RS DQ  A     ++   +++ + A+++A+   + +IL ++ + +     D+TD  L  L+K++P
Sbjct:   35 APKIAIIDVQKIIRESEAVRSLAKEVDARRAKVQAALREKENGLRAADQELARQRSILSAEAFAQKRKELERQVGLLQREIKDQRRSLDQEFARG---IQQVQRELALIAKDMAEKRGLDMILSKATIVIVKPEFDLTDEALKLLNKRLP 181          
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A2H6AVP6_9BACT (Uncharacterized protein n=1 Tax=bacterium HR39 TaxID=2035434 RepID=A0A2H6AVP6_9BACT)

HSP 1 Score: 82.4 bits (202), Expect = 1.220e-16
Identity = 47/148 (31.76%), Postives = 81/148 (54.73%), Query Frame = 0
Query:    4 IALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNRLQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKKMPTLKL 151
            +A++DYQR+LRE+K  Q   +Q+  +    E  ++  Q  L   E EL RQR +LSPEAF +RR  FE++ A   RL +    ++  A  ++       +     E+A+     L+L  S V + A  +D+T++VL  +D+ +P +++
Sbjct:   30 VAVVDYQRVLREAKAAQSIRRQLEERRAAFEREVREEQARLVERERELTRQRPLLSPEAFAERRRQFEEEAARVQRLVQSRRQELDRAAAEAYARVRDAVVRVVSELAEEKGFNLVLPSSAVLLFAPELDLTEDVLKGVDRILPDVRV 177          
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A2M7GFK9_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillales bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_66_15 TaxID=1974092 RepID=A0A2M7GFK9_9PROT)

HSP 1 Score: 82.4 bits (202), Expect = 1.440e-16
Identity = 49/151 (32.45%), Postives = 85/151 (56.29%), Query Frame = 0
Query:    1 AVTIALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNRLQKRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKKMPTLKL 151
            A  +A++D QR+LRE+K M++   Q++   K  +G I+ +Q+E         R+RT+LSP+AF + R  F++ VAE  RL +    Q+  AN +++    +       E+A   +  LI R+S   +    +++T  VLA LDK++PT+ +
Sbjct:   45 AAKVAVLDVQRILREAKAMKNIRDQVSQLRKTYQGEIEKKQEEXXXXXXXXXRKRTILSPDAFDEERRKFDQKVAEVQRLVQTRNQQLDRANAEAVIEVQKVYNQIVVELANERSYGLIFRKSATVVVHPPIEVTPEVLARLDKRLPTVSV 195          
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Match: A0A2H6AXQ0_9BACT (Uncharacterized protein n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6AXQ0_9BACT)

HSP 1 Score: 82.0 bits (201), Expect = 2.230e-16
Identity = 51/151 (33.77%), Postives = 89/151 (58.94%), Query Frame = 0
Query:    4 IALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETELKRQRTVLSPEAFQKRRTDFEKDVAEFNRLQ---KRSADQITAANQQSLKAADQQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKKMPTLKL 151
            +A++DYQRLLR+++  +    QI A+ +  +  I+  ++ L   E EL RQR VLS EA+ ++R++FE++ A   R+    +R  D ++AA    L+ A   I      +AK+    L+L  S V + +  +D+T+  LAALD+++P +K+
Sbjct:   53 VAVVDYQRLLRDARAAKSIRAQIEARQQRYQDQIRQEEQRLVEQERELTRQRGVLSTEAYAQKRSEFEQEAARVQRMVQELRRELDGVSAAAYGELRNA---IIEVVGGLAKSRGFNLVLPSSAVLLFSPQLDLTEEALAALDRRLPEVKV 200          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94639.31003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X2FWV6_9PROT2.010e-9298.05Uncharacterized protein n=2 Tax=Alphaproteobacteri... [more]
A0A7X0EBC7_9PROT4.160e-1936.60Skp family chaperone for outer membrane proteins n... [more]
A0A7V2T7Q0_9PROT1.150e-1832.43OmpH family outer membrane protein n=1 Tax=Rhodosp... [more]
A0A357V1R4_9PROT1.200e-1833.77Uncharacterized protein n=5 Tax=Rhodospirillales T... [more]
A0A212R7B5_9PROT3.540e-1832.65Periplasmic chaperone for outer membrane proteins ... [more]
A0A7C2A7S1_9PROT3.460e-1735.42OmpH family outer membrane protein (Fragment) n=1 ... [more]
A0A3M0XRE6_9PROT1.120e-1630.67OmpH family outer membrane protein n=1 Tax=Alphapr... [more]
A0A2H6AVP6_9BACT1.220e-1631.76Uncharacterized protein n=1 Tax=bacterium HR39 Tax... [more]
A0A2M7GFK9_9PROT1.440e-1632.45Uncharacterized protein n=1 Tax=Rhodospirillales b... [more]
A0A2H6AXQ0_9BACT2.230e-1633.77Uncharacterized protein n=1 Tax=bacterium HR40 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..57
NoneNo IPR availableSUPERFAMILY111384OmpH-likecoord: 2..143
IPR005632Chaperone protein SkpSMARTSM00935OmpH_2coord: 3..143
e-value: 1.9E-20
score: 84.0
IPR005632Chaperone protein SkpPFAMPF03938OmpHcoord: 4..142
e-value: 4.7E-22
score: 78.8
IPR005632Chaperone protein SkpPANTHERPTHR35089FAMILY NOT NAMEDcoord: 3..145
IPR024930Skp domain superfamilyGENE3D3.30.910.20coord: 1..154
e-value: 3.8E-29
score: 104.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94639contigEcto-sp8_S_contig94639:129..593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94639.31003.1mRNA_Ecto-sp8_S_contig94639.31003.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94639 129..593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94639.31003.1 ID=prot_Ecto-sp8_S_contig94639.31003.1|Name=mRNA_Ecto-sp8_S_contig94639.31003.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=155bp
AVTIALIDYQRLLRESKGMQDAAKQINAKGKELEGVIKNRQKELQAAETE
LKRQRTVLSPEAFQKRRTDFEKDVAEFNRLQKRSADQITAANQQSLKAAD
QQIFISAQEIAKANNITLILRRSNVYMAAEAMDITDNVLAALDKKMPTLK
LNFK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005632Chaperone_Skp
IPR024930Skp_dom_sf