prot_Ecto-sp8_S_contig94602.30997.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94602.30997.1
Unique Nameprot_Ecto-sp8_S_contig94602.30997.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: A0A0U2LGM4_9MAXI (40S ribosomal protein S25 n=2 Tax=Labidocera rotunda TaxID=207950 RepID=A0A0U2LGM4_9MAXI)

HSP 1 Score: 186 bits (473), Expect = 4.090e-59
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKKKEGGXXXXXXXKWSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKDNEEE 117
            MGAKKDPKA  K PAK PKKKEGGXXXXXXXKWSKGKSRDKLNNLVLFD+GTYDKLYKEVPTYKLITPSIVSERLKVRGSLAR+AL EL EKGLI++VV+HRSQ IYTRVTKDNE+E
Sbjct:    1 MGAKKDPKASFKTPAKTPKKKEGGXXXXXXXKWSKGKSRDKLNNLVLFDKGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARKALCELAEKGLIREVVSHRSQMIYTRVTKDNEDE 117          
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: A0A0U2T866_9MAXI (40S ribosomal protein S25 n=3 Tax=Calanoida TaxID=6833 RepID=A0A0U2T866_9MAXI)

HSP 1 Score: 186 bits (472), Expect = 5.810e-59
Identity = 97/117 (82.91%), Postives = 104/117 (88.89%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKKKEGGXXXXXXXKWSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKDNEEE 117
            MGAKKDPKA AK PAK PKKKEGG       KWSKGKSRDKLNNLVLFD+ TYDKLYKEVPTYKLITPSIVSERLKVRGSLAR+AL+ELTEKGLI++VVAH +Q IYTRVTKDNE+E
Sbjct:    1 MGAKKDPKASAKTPAKTPKKKEGGGGKAKKKKWSKGKSRDKLNNLVLFDKNTYDKLYKEVPTYKLITPSIVSERLKVRGSLARKALIELTEKGLIREVVAHSAQKIYTRVTKDNEDE 117          
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: A0A0U2TJQ4_ACAPC (40S ribosomal protein S25 n=6 Tax=Acartia pacifica TaxID=335913 RepID=A0A0U2TJQ4_ACAPC)

HSP 1 Score: 186 bits (472), Expect = 6.610e-59
Identity = 97/118 (82.20%), Postives = 104/118 (88.14%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKKKEGGXXXXXXXKWSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKDNEEEE 118
            MGAKKDPKA AK PAK PKKKEGG       KWSKGK+RDKLNNLVLFD+GTYDKLYKEVP+YKLITPSIVSERLKVRGSLARRAL+EL  KGLI+QVV+HRSQ IYTRVTKD +EEE
Sbjct:    1 MGAKKDPKASAKTPAKTPKKKEGGGGKAKKKKWSKGKARDKLNNLVLFDKGTYDKLYKEVPSYKLITPSIVSERLKVRGSLARRALIELAGKGLIRQVVSHRSQMIYTRVTKDTDEEE 118          
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: A0A0U2UPD0_9MAXI (40S ribosomal protein S25 n=3 Tax=Pseudodiaptomus poplesia TaxID=213370 RepID=A0A0U2UPD0_9MAXI)

HSP 1 Score: 176 bits (446), Expect = 5.510e-55
Identity = 104/118 (88.14%), Postives = 109/118 (92.37%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKKKEGGXXXXXXX-KWSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKDNEEE 117
            MGAKKDPK  AK P+K PKKKEGGXXXXXXX KWSKGKSRDKLNNLVLFD+ TYDKL KEVPTYKLITPSIVSERLKVRGSLARRAL+EL +KGLIK VVAHRSQFIYTRVTKDNE+E
Sbjct:    1 MGAKKDPKKDAKQPSKTPKKKEGGXXXXXXXXKWSKGKSRDKLNNLVLFDKVTYDKLCKEVPTYKLITPSIVSERLKVRGSLARRALIELGQKGLIKCVVAHRSQFIYTRVTKDNEDE 118          
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: A0A0U2UQ73_9MAXI (40S ribosomal protein S25 n=1 Tax=Paracalanus parvus TaxID=187406 RepID=A0A0U2UQ73_9MAXI)

HSP 1 Score: 171 bits (432), Expect = 1.940e-52
Identity = 90/117 (76.92%), Postives = 97/117 (82.91%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKKKEGGXXXXXXXKWSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKDNEEE 117
            MGAKKDPK  +K PAK PKKKEGG       KWSKGKSRDKLNNLVLFD+ TYDKLYKEVPTYKLITPSIVSERLKVRGSLA+RAL E+ EK LIK+V AHRSQ IYTR+ KD  E+
Sbjct:    1 MGAKKDPKKDSKTPAKTPKKKEGGGGKAKKKKWSKGKSRDKLNNLVLFDKNTYDKLYKEVPTYKLITPSIVSERLKVRGSLAKRALEEMAEKNLIKRVSAHRSQLIYTRMIKDEAED 117          
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: A0A7R9BY45_9CRUS (40S ribosomal protein S25 n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BY45_9CRUS)

HSP 1 Score: 161 bits (408), Expect = 2.990e-49
Identity = 88/117 (75.21%), Postives = 94/117 (80.34%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKK-KEGGXXXXXXXKWSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKDNEE 116
            MGAKKDPKA AK  +K PKK KEGG       KWSKGK RDKLNNLVLFDQ TYDKLYKEVP+YKLITPS+VSERLK+RGSLARRAL+EL  KGLIK VV HRSQ IYTR  K + E
Sbjct:    1 MGAKKDPKASAKATSKTPKKPKEGGSGKAKKKKWSKGKVRDKLNNLVLFDQATYDKLYKEVPSYKLITPSVVSERLKIRGSLARRALIELQSKGLIKLVVKHRSQKIYTRAVKGDAE 117          
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: A0A553PJV9_TIGCA (40S ribosomal protein S25 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PJV9_TIGCA)

HSP 1 Score: 161 bits (407), Expect = 4.520e-49
Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKKKEGGXXXXXXX-KWSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKDNEEEE 118
            MGAKKD K+ +K PAKAPKKKEG XXXXXXX KWSKGK+RDKLNNLVLFDQGTYDK+ KEVPTYKLITPSIVSER+KVRGSLAR+AL EL +KGLI+QVV H +Q IYTRV KD ++ E
Sbjct:    1 MGAKKDAKSTSKAPAKAPKKKEGXXXXXXXXXKWSKGKTRDKLNNLVLFDQGTYDKMLKEVPTYKLITPSIVSERMKVRGSLARKALTELVQKGLIRQVVQHSAQTIYTRVIKDEDDAE 119          
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: A0A7R8CIY0_LEPSM (40S ribosomal protein S25 n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A7R8CIY0_LEPSM)

HSP 1 Score: 157 bits (396), Expect = 2.210e-47
Identity = 90/114 (78.95%), Postives = 94/114 (82.46%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKKKEGGXXXXXXXK-WSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKD 113
            MGAKKD K  +K PAKAPKKKEGG       K WSKGKSRDKLNNLVLFDQ TYDKL KEV TYKLITPSIVSERLKVRGSLAR+AL EL +KGLIKQVV H +Q IYTRVTKD
Sbjct:    1 MGAKKDTK-NSKAPAKAPKKKEGGSGGKAKKKKWSKGKSRDKLNNLVLFDQATYDKLIKEVTTYKLITPSIVSERLKVRGSLARKALHELLQKGLIKQVVHHGAQSIYTRVTKD 113          
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: A0A6J2YHM9_SITOR (40S ribosomal protein S25 n=19 Tax=Endopterygota TaxID=33392 RepID=A0A6J2YHM9_SITOR)

HSP 1 Score: 145 bits (367), Expect = 5.570e-43
Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKKKEGGXXXXXXX-KWSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKDNE 115
            M  KKD KAGAK P K  KK    XXXXXXX KWSKGK RDKLNN VLFD+ TYDKLYKEVP+YKLITPS+VSERLKVRGSLARRAL+EL +KGLIKQVV HR+Q IYTR TK ++
Sbjct:    1 MPPKKDSKAGAKQPQKTQKKXXXXXXXXXXXXKWSKGKVRDKLNNQVLFDKATYDKLYKEVPSYKLITPSVVSERLKVRGSLARRALIELQQKGLIKQVVQHRAQLIYTRTTKGDD 116          
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Match: UPI00083C3367 (40S ribosomal protein S25 n=1 Tax=Eufriesea mexicana TaxID=516756 RepID=UPI00083C3367)

HSP 1 Score: 145 bits (366), Expect = 7.910e-43
Identity = 80/116 (68.97%), Postives = 89/116 (76.72%), Query Frame = 0
Query:    1 MGAKKDPKAGAKVPAKAPKKKEGGXXXXXXXK-WSKGKSRDKLNNLVLFDQGTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVAHRSQFIYTRVTKDNE 115
            M  KKD K  +K P K  KKKEGG       K WSKGK RDKLNN VLFD+GTY+KL KEVP YKLITPSIVSERLK+RGSLARRAL+EL +KGLIKQVV H +Q IYTR TK ++
Sbjct:    1 MPPKKDTKGSSKQPQKIQKKKEGGSGGKAKKKKWSKGKVRDKLNNQVLFDKGTYEKLLKEVPLYKLITPSIVSERLKIRGSLARRALIELQQKGLIKQVVQHHAQLIYTRTTKGDD 116          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94602.30997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U2LGM4_9MAXI4.090e-5988.8940S ribosomal protein S25 n=2 Tax=Labidocera rotun... [more]
A0A0U2T866_9MAXI5.810e-5982.9140S ribosomal protein S25 n=3 Tax=Calanoida TaxID=... [more]
A0A0U2TJQ4_ACAPC6.610e-5982.2040S ribosomal protein S25 n=6 Tax=Acartia pacifica... [more]
A0A0U2UPD0_9MAXI5.510e-5588.1440S ribosomal protein S25 n=3 Tax=Pseudodiaptomus ... [more]
A0A0U2UQ73_9MAXI1.940e-5276.9240S ribosomal protein S25 n=1 Tax=Paracalanus parv... [more]
A0A7R9BY45_9CRUS2.990e-4975.2140S ribosomal protein S25 n=1 Tax=Notodromas monac... [more]
A0A553PJV9_TIGCA4.520e-4978.9940S ribosomal protein S25 n=1 Tax=Tigriopus califo... [more]
A0A7R8CIY0_LEPSM2.210e-4778.9540S ribosomal protein S25 n=2 Tax=Lepeophtheirus s... [more]
A0A6J2YHM9_SITOR5.570e-4375.8640S ribosomal protein S25 n=19 Tax=Endopterygota T... [more]
UPI00083C33677.910e-4368.9740S ribosomal protein S25 n=1 Tax=Eufriesea mexica... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004977Ribosomal protein S25PFAMPF03297Ribosomal_S25coord: 15..109
e-value: 5.6E-44
score: 148.5
IPR004977Ribosomal protein S25PANTHERPTHR12850FAMILY NOT NAMEDcoord: 7..112
NoneNo IPR availableGENE3D1.10.10.2780coord: 26..117
e-value: 1.2E-39
score: 136.2
NoneNo IPR availablePRODOMPD012268coord: 46..112
e-value: 6.0E-27
score: 294.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94602contigEcto-sp8_S_contig94602:174..527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94602.30997.1mRNA_Ecto-sp8_S_contig94602.30997.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94602 174..527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94602.30997.1 ID=prot_Ecto-sp8_S_contig94602.30997.1|Name=mRNA_Ecto-sp8_S_contig94602.30997.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=118bp
MGAKKDPKAGAKVPAKAPKKKEGGGGKAKKKKWSKGKSRDKLNNLVLFDQ
GTYDKLYKEVPTYKLITPSIVSERLKVRGSLARRALLELTEKGLIKQVVA
HRSQFIYTRVTKDNEEEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004977Ribosomal_S25