prot_Ecto-sp8_S_contig94569.30990.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94569.30990.1
Unique Nameprot_Ecto-sp8_S_contig94569.30990.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length55
Homology
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 9.270e-27
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 VLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDV 55
            VLPEPLLSEK+RLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDV
Sbjct:  906 VLPEPLLSEKVRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDV 960          
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.340e-11
Identity = 31/55 (56.36%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 VLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDV 55
            +LP  L +EK  LL++GF+DW+K  Y +FVRASAK+GR   D+IA EVGK E +V
Sbjct:  938 LLPPDLAAEKAALLAQGFSDWTKPHYQLFVRASAKYGRRHVDKIALEVGKTEAEV 992          
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: A0A7S2F8H7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8H7_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.440e-9
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    7 LSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDV 55
            L EK RLLSEGFADW++  ++ F RA+AK+GR  + RIA +VGK+E DV
Sbjct:   96 LLEKTRLLSEGFADWTRQHFVNFQRAAAKYGREDFHRIAIDVGKSEADV 144          
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: A0A7S2F963_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F963_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.450e-9
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    7 LSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDV 55
            L EK RLLSEGFADW++  ++ F RA+AK+GR  + RIA +VGK+E DV
Sbjct:  264 LLEKTRLLSEGFADWTRQHFVNFQRAAAKYGREDFHRIAIDVGKSEADV 312          
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: A0A1E7FBL6_9STRA (SNF2_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBL6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.100e-9
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    1 VLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDV 55
            +L E +  EK  LL EGF  WS+  Y +F +ASAKHGR  + +IA+EVGK+E ++
Sbjct:  972 LLSEEVQEEKNALLGEGFIGWSRMNYTLFTKASAKHGRSHFVKIASEVGKSEAEI 1026          
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: A0A7S3HIT7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIT7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.300e-8
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 VLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGK 50
            VLP  L  EK +L++ GF DW+K  +  FVRASAKHGR  +++IA +VG+
Sbjct:  607 VLPPELHEEKTQLVAAGFGDWTKVHFNNFVRASAKHGRSEFEKIAKDVGR 656          
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: A0A7S2W5J4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5J4_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.300e-8
Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    9 EKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGKAEKDV 55
            EK +LL+E F DW++  Y  F++ASAKHGR  Y +IA +VGK+E++V
Sbjct:  792 EKQQLLTEAFGDWARQHYQQFIKASAKHGRKDYAKIAVDVGKSEEEV 838          
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: A0A7S3VDF6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDF6_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.560e-8
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    1 VLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEV 48
            +LP+   +EKL LL EGFADW+K+QY  FV+A+AK GR     IAA++
Sbjct:  953 ILPDEFATEKLELLQEGFADWTKSQYFHFVKAAAKFGREDISSIAADM 1000          
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: M2WX80_GALSU (Chromatin remodeling complex / DNA-dep ATPase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WX80_GALSU)

HSP 1 Score: 55.8 bits (133), Expect = 1.160e-7
Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0
Query:    1 VLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVG-KAEKDV 55
            +LP     EK  LLSEGF +WS+ ++  FVR   +HGR AY+ IAAE+G K+ K+V
Sbjct:  787 LLPADKEQEKQILLSEGFGNWSRREFQAFVRGCERHGREAYETIAAEIGSKSVKEV 842          
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Match: F0YQX1_AURAN (SLIDE domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQX1_AURAN)

HSP 1 Score: 54.3 bits (129), Expect = 3.750e-7
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    9 EKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEV 48
            EK  L++ GF  W+K  Y +F+RASA+HGR AYDRIAA++
Sbjct:   67 EKETLMTRGFTTWTKQHYTLFLRASARHGRDAYDRIAADL 106          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94569.30990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FV68_ECTSI9.270e-2798.18Probable chromatin remodelling complex ATPase chai... [more]
A0A835YGX5_9STRA1.340e-1156.36Putative chromatin remodelling complex ATPase chai... [more]
A0A7S2F8H7_9STRA1.440e-959.18Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2F963_9STRA1.450e-959.18Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A1E7FBL6_9STRA5.100e-949.09SNF2_N-domain-containing protein n=1 Tax=Fragilari... [more]
A0A7S3HIT7_9STRA1.300e-852.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2W5J4_9STRA1.300e-853.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3VDF6_9STRA4.560e-854.17Hypothetical protein (Fragment) n=2 Tax=Chaetocero... [more]
M2WX80_GALSU1.160e-750.00Chromatin remodeling complex / DNA-dep ATPase n=1 ... [more]
F0YQX1_AURAN3.750e-757.50SLIDE domain-containing protein n=1 Tax=Aureococcu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 17..55
e-value: 3.0E-10
score: 42.2
NoneNo IPR availablePANTHERPTHR10799:SF979coord: 2..53
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94569contigEcto-sp8_S_contig94569:140..304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94569.30990.1mRNA_Ecto-sp8_S_contig94569.30990.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94569 140..304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94569.30990.1 ID=prot_Ecto-sp8_S_contig94569.30990.1|Name=mRNA_Ecto-sp8_S_contig94569.30990.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=55bp
VLPEPLLSEKLRLLSEGFADWSKAQYMIFVRASAKHGRGAYDRIAAEVGK
AEKDV
back to top