prot_Ecto-sp8_S_contig94560.30988.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94560.30988.1
Unique Nameprot_Ecto-sp8_S_contig94560.30988.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length197
Homology
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: UPI001FE558CE (BamA/TamA family outer membrane protein n=2 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001FE558CE)

HSP 1 Score: 342 bits (878), Expect = 1.370e-111
Identity = 165/197 (83.76%), Postives = 183/197 (92.89%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQY+LD++ALPGL++A+APDPENFR+ FGL  GEVINSDRI+ A+ RLD+AMAENGYPFAET EP LEIDHAER GDL + VTPGGKYNFGSI M++TDLFGPDHVQMIARFDPGD+YQASD+EDLRRALIATGL+ST+SIDPVVAEDP AVDIAV+VT APLRTIAGELGYGTGEGARAA SWEHRNFFPPEGLIR
Sbjct:  208 PQYQLDEIALPGLESALAPDPENFRERFGLESGEVINSDRIMDAKGRLDLAMAENGYPFAETAEPELEIDHAERLGDLDIKVTPGGKYNFGSIVMDRTDLFGPDHVQMIARFDPGDVYQASDVEDLRRALIATGLISTVSIDPVVAEDPAAVDIAVNVTPAPLRTIAGELGYGTGEGARAAASWEHRNFFPPEGLIR 404          
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: A0A2M7LH40_9SPHN (Omp85 domain-containing protein n=1 Tax=Sphingomonadales bacterium CG_4_10_14_3_um_filter_58_15 TaxID=1974093 RepID=A0A2M7LH40_9SPHN)

HSP 1 Score: 330 bits (847), Expect = 4.280e-107
Identity = 161/197 (81.73%), Postives = 175/197 (88.83%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQYELD ++LPGL  AVAPDPE FRD FGL  G ++NSDRI+ A TRLDVAMAENGY FA+TGEP LEIDHAER GDL + VTPGG+Y+FGSI M QTDLFGPDHVQMIARF+PGD+YQASDLEDLRRALIATGLVSTIS+DPVV EDP AVDIAV+V  APLRTIAGELGYGTGEGARA VSWEHRNFFPPEGL+R
Sbjct:  195 PQYELDAISLPGLAAAVAPDPEKFRDIFGLQSGAIVNSDRIMEAITRLDVAMAENGYAFAQTGEPQLEIDHAERLGDLEVPVTPGGRYHFGSILMAQTDLFGPDHVQMIARFNPGDLYQASDLEDLRRALIATGLVSTISVDPVVGEDPKAVDIAVNVAPAPLRTIAGELGYGTGEGARAEVSWEHRNFFPPEGLVR 391          
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: A0A220W609_9SPHN (Translocation and assembly module TamA n=1 Tax=Sphingorhabdus sp. SMR4y TaxID=2584094 RepID=A0A220W609_9SPHN)

HSP 1 Score: 325 bits (833), Expect = 7.310e-105
Identity = 157/197 (79.70%), Postives = 176/197 (89.34%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQY+LD +ALPGL++AVAPDP NFR+SFGL PG+++NSDRI+ A  R+D AMAENGYPFAETGEP LEIDHAER GDL + VTPGG+YNFGSI +  TDLF  DHVQMIARF PGDIYQASDLEDLRRALIATGLVSTI+IDPV A+DP+AVD+AV +T APLRT+AGELGYGTGEGARA VSWEHRNFFPPEGLIR
Sbjct:  208 PQYKLDTIALPGLESAVAPDPVNFRESFGLQPGDIVNSDRIMEAIGRIDGAMAENGYPFAETGEPELEIDHAERLGDLEVQVTPGGRYNFGSIVLAPTDLFDADHVQMIARFAPGDIYQASDLEDLRRALIATGLVSTIAIDPVAADDPEAVDVAVALTPAPLRTVAGELGYGTGEGARAEVSWEHRNFFPPEGLIR 404          
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: A0A2G2D1P0_9SPHN (Omp85 domain-containing protein n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2D1P0_9SPHN)

HSP 1 Score: 321 bits (822), Expect = 2.170e-103
Identity = 154/197 (78.17%), Postives = 175/197 (88.83%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQY+LD +ALPGL+ AV+PDP  FR++FGL  G V NSD I++A +RLDVAMAE+GYPFAET EP LEIDHA R GDL + VTPGG++NFGSI M+QTDLFGPDHVQMIARF PGD+YQASDLEDLRRALIATGLVSTIS++PV  +DPDAVDIAV+V+ APLRTIAGELGYGTGEGARA VSWEHRNFFPPEGL+R
Sbjct:  192 PQYKLDDIALPGLEAAVSPDPVKFRETFGLQSGAVFNSDAIMSAISRLDVAMAESGYPFAETAEPELEIDHAGRLGDLTVPVTPGGRFNFGSIVMDQTDLFGPDHVQMIARFKPGDLYQASDLEDLRRALIATGLVSTISVEPVAGDDPDAVDIAVNVSPAPLRTIAGELGYGTGEGARAEVSWEHRNFFPPEGLVR 388          
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: A0A127MIX8_9SPHN (Omp85 domain-containing protein n=2 Tax=Sphingorhabdus sp. M41 TaxID=1806885 RepID=A0A127MIX8_9SPHN)

HSP 1 Score: 319 bits (817), Expect = 7.190e-103
Identity = 154/197 (78.17%), Postives = 172/197 (87.31%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQYELD +ALPGL+TA+APDP+ FRDSFGL  G+++NSDRI+ A  RLD AMAENGYPFA+TGEP LEIDHAER GDL + VTPGG++NFGSI +  T LF  DHVQMIARFDPGD+YQASD+EDLRRALIATGLVSTIS+DPV A DP AVDIAV +T APLRT+AGELGYGTGEGARA VSWEHRN FPPEGLIR
Sbjct:  171 PQYELDAIALPGLETAIAPDPQKFRDSFGLQSGDIVNSDRIMDAIARLDGAMAENGYPFAKTGEPELEIDHAERLGDLEVPVTPGGRFNFGSIVLAPTKLFDADHVQMIARFDPGDLYQASDVEDLRRALIATGLVSTISVDPVAAADPAAVDIAVSLTPAPLRTVAGELGYGTGEGARAEVSWEHRNLFPPEGLIR 367          
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: A0A653JBZ5_9SPHN (Translocation and assembly module TamA n=1 Tax=Sphingorhabdus sp. 109 TaxID=2653173 RepID=A0A653JBZ5_9SPHN)

HSP 1 Score: 314 bits (805), Expect = 1.100e-100
Identity = 151/197 (76.65%), Postives = 173/197 (87.82%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQY+LD +ALPG++TAVAPDP +FR+SFGL PG+V+NSDRI+ A +R+D  MAENGYPFA T EP LEIDHA R GDLA+ VTPGG+YNFGSI +  T LF  DHVQMIARFDPGD+YQASDLEDLRRAL+ATGLVSTI+I+PV A+DP+AVDIAV +T APLRT+AGELGYGTGEGARA VSWEHRN FPPEGLIR
Sbjct:  208 PQYKLDAIALPGIETAVAPDPASFRESFGLQPGDVVNSDRIMEAISRIDGTMAENGYPFASTAEPELEIDHATRLGDLAVAVTPGGRYNFGSIDLAPTALFDADHVQMIARFDPGDLYQASDLEDLRRALVATGLVSTIAIEPVKADDPEAVDIAVKLTPAPLRTVAGELGYGTGEGARAEVSWEHRNLFPPEGLIR 404          
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: A0A2D3RAW2_9SPHN (Omp85 domain-containing protein n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D3RAW2_9SPHN)

HSP 1 Score: 313 bits (801), Expect = 4.150e-100
Identity = 147/197 (74.62%), Postives = 173/197 (87.82%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQY+LD + L GL+ AV PDP +FR++FGL PG+V+NSDRI+ A  R+DVAMAENGYPFA+TGEP LEIDHAER GDL + VTPGG+YNFGS+ +  T+LF  DHVQMIARF+PGD+YQASDLEDLRRALIATGLVST+++DPVVA+DP+AVD+AV +T APLRT+AGELGYGTGEGARA VSWEHRN FPPEGL R
Sbjct:  206 PQYKLDAIVLSGLEAAVDPDPVDFRETFGLQPGDVVNSDRIVEAIGRIDVAMAENGYPFAKTGEPELEIDHAERLGDLEVPVTPGGRYNFGSVVLAPTELFDADHVQMIARFNPGDLYQASDLEDLRRALIATGLVSTVNVDPVVADDPEAVDVAVKLTPAPLRTVAGELGYGTGEGARAEVSWEHRNLFPPEGLFR 402          
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: A0A6H2DPU6_9SPHN (BamA/TamA family outer membrane protein n=2 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DPU6_9SPHN)

HSP 1 Score: 296 bits (757), Expect = 2.750e-93
Identity = 139/197 (70.56%), Postives = 166/197 (84.26%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQY+   + LPGL+TA   DP NFR  FGL PG ++NSD IIAAQ RLD AMAENGY F++TGEP L IDHA+R GDL   V PGGKYNFG+I M  T+LFGP+H Q+IARF+PGDIY+ASD+EDLRRALI+TGL+STI+++PV+++DPD VD+A+++T APLRTIAGELGYGTGEGARA VSWEHRN FPPEGLIR
Sbjct:  234 PQYKFADILLPGLETAAGSDPANFRSVFGLEPGAILNSDGIIAAQLRLDEAMAENGYAFSKTGEPDLVIDHADRNGDLTQPVMPGGKYNFGAIKMASTELFGPEHAQLIARFEPGDIYKASDVEDLRRALISTGLISTITMEPVISDDPDKVDLAINLTPAPLRTIAGELGYGTGEGARAEVSWEHRNLFPPEGLIR 430          
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: A0A1B6Z8U2_9SPHN (Omp85 domain-containing protein n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z8U2_9SPHN)

HSP 1 Score: 291 bits (746), Expect = 2.980e-92
Identity = 140/197 (71.07%), Postives = 162/197 (82.23%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQY+L  VALPGL+ A   D   FR+SF L  G++INSD II A  RLD AMAENGY FAETGEP LEIDHAER GDL + VTPG +YNFGSI M  +DLF  DHVQMIARFDPG++Y  SD+EDLRRALI TGL+STI+++PV ++DPD VD+AVD+T APLRTI+G+LGYGTGEGARA VSWEHRNFFPPEGL+R
Sbjct:  173 PQYQLSAVALPGLEQAGEQDSVRFRESFALESGQIINSDAIIEASDRLDEAMAENGYAFAETGEPELEIDHAERDGDLEIIVTPGARYNFGSIIMADSDLFAADHVQMIARFDPGELYNESDVEDLRRALIGTGLISTITVEPVESQDPDRVDLAVDLTPAPLRTISGQLGYGTGEGARAEVSWEHRNFFPPEGLLR 369          
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Match: UPI001A9DAC31 (BamA/TamA family outer membrane protein n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001A9DAC31)

HSP 1 Score: 272 bits (695), Expect = 5.100e-84
Identity = 130/198 (65.66%), Postives = 157/198 (79.29%), Query Frame = 0
Query:    1 PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDVAMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDLFGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAED-PDAVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR 197
            PQY LD + L G+D A   DP+ FR+ FGL  G+V+NSD I  A+TRLD AMAENGYPFA T +PAL IDHAER+GDL + VTPG KY FGSI M  T+LFGP+H ++IARFD GD+Y+ SD+EDLRRAL+ATGLVST ++ PV +E+ P  VDI+  VT APLRTI+G LGYGTGEG R+ ++WEHRNFFPPEGLIR
Sbjct:  244 PQYRLDTIVLDGIDQAQEDDPQQFREQFGLQSGDVVNSDAIADARTRLDQAMAENGYPFAATDQPALVIDHAERQGDLDIVVTPGEKYVFGSILMTNTELFGPEHAELIARFDEGDLYKQSDIEDLRRALVATGLVSTAALQPVASEEKPGVVDISATVTPAPLRTISGALGYGTGEGLRSEINWEHRNFFPPEGLIR 441          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94560.30988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001FE558CE1.370e-11183.76BamA/TamA family outer membrane protein n=2 Tax=Pa... [more]
A0A2M7LH40_9SPHN4.280e-10781.73Omp85 domain-containing protein n=1 Tax=Sphingomon... [more]
A0A220W609_9SPHN7.310e-10579.70Translocation and assembly module TamA n=1 Tax=Sph... [more]
A0A2G2D1P0_9SPHN2.170e-10378.17Omp85 domain-containing protein n=1 Tax=Sphingopyx... [more]
A0A127MIX8_9SPHN7.190e-10378.17Omp85 domain-containing protein n=2 Tax=Sphingorha... [more]
A0A653JBZ5_9SPHN1.100e-10076.65Translocation and assembly module TamA n=1 Tax=Sph... [more]
A0A2D3RAW2_9SPHN4.150e-10074.62Omp85 domain-containing protein n=2 Tax=Sphingomon... [more]
A0A6H2DPU6_9SPHN2.750e-9370.56BamA/TamA family outer membrane protein n=2 Tax=Pa... [more]
A0A1B6Z8U2_9SPHN2.980e-9271.07Omp85 domain-containing protein n=1 Tax=Sphingomon... [more]
UPI001A9DAC315.100e-8465.66BamA/TamA family outer membrane protein n=1 Tax=Pa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.310coord: 88..163
e-value: 1.6E-11
score: 46.3
NoneNo IPR availableGENE3D3.10.20.310coord: 1..87
e-value: 5.3E-5
score: 25.5
NoneNo IPR availablePANTHERPTHR12815:SF12TRANSLOCATION AND ASSEMBLY MODULE SUBUNIT TAMAcoord: 26..187
IPR039910Surface antigen D15-likePANTHERPTHR12815SORTING AND ASSEMBLY MACHINERY SAM50 PROTEINcoord: 26..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94560contigEcto-sp8_S_contig94560:5..595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94560.30988.1mRNA_Ecto-sp8_S_contig94560.30988.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94560 5..595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94560.30988.1 ID=prot_Ecto-sp8_S_contig94560.30988.1|Name=mRNA_Ecto-sp8_S_contig94560.30988.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=197bp
PQYELDQVALPGLDTAVAPDPENFRDSFGLLPGEVINSDRIIAAQTRLDV
AMAENGYPFAETGEPALEIDHAERKGDLALTVTPGGKYNFGSIFMEQTDL
FGPDHVQMIARFDPGDIYQASDLEDLRRALIATGLVSTISIDPVVAEDPD
AVDIAVDVTAAPLRTIAGELGYGTGEGARAAVSWEHRNFFPPEGLIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039910D15-like