prot_Ecto-sp8_S_contig9451.30979.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9451.30979.1
Unique Nameprot_Ecto-sp8_S_contig9451.30979.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length1399
Homology
BLAST of mRNA_Ecto-sp8_S_contig9451.30979.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 2338 bits (6060), Expect = 0.000e+0
Identity = 1259/1468 (85.76%), Postives = 1286/1468 (87.60%), Query Frame = 0
Query:    1 MVGEGESLLSPFRPIASGAVDVSGAVVSVSVTAMQCIEQCIAELTRRPSDEXXXXXXXTTAEAKPSVVAVPAPVPPPRQPRQRSKRYIITNHTDRNLWFGQVSTTETLFLRAGEETLYRWRTIPHTLAAGAAGRKGDDASRLVLMLRLALHRVSGSGGGYAGAGSEHGGGYGAWTEPFPVDHVGTFKRLLRGAEAEGQVGAGASARGAGHQESDFVTLPLWVEVVKNGLETRIAFHGEWVFTNHLPQEIQVAWVTSAGVGNAGRCLVEPAGTRGGLSLGACATSGRAGGALHPVSCSALTASSSSPGAGQAHDERLSELMLEFRLSTPDAAAFVGSVGPPPVATEDSAGHPAAARDAGGFGDGGSYDRRGLDDELLQGREEIEVDSSGSPWEVTRQSEWVQARPFVFLALISCASTDPGISGFAFWCVASRQASSATNGHRGNLGQMRIDLHPMALVWNGSSIPMRAVLKHRSGGGGWPEQPPATLAEAVDEQGGAGGGHAADRNDDPRANYSLSRTTSAIPPGGRTAVCQRPFVDYDLAVASTGTAARQASPFLVSVPAELLSRRCESTWLPLHSRALSDNVLSPLVVVASRLLDANWPSLSLRVYSGLSVENHLSVPLSLRADFIRPLLGSDGEPSAQQPAEAPVTERGEPERAQTEEEEEQATAP-LLRLRGSESVSVDGGG-EAGSGRRAVARVSRIFRAGAESCLSAWDMFHGLEGFSIPFLLPHVSLDIGLDSREEVSPSPATASACAGWSSLVPPGRSAEEVPGGPTPPTPAERRSRKLKVSLAEELNELVLVPWEASSGVVLPVLATLEREVVLGGVELIRLALYPRVVVHNATGVPVSLSLLGGAHAAAEDDKTGGGARNEALPMCRVGLTPDGSGSRVNLLAIPGERALPGLDTSLHGSPRSAAGRGEGGRAGGGRGFPLENDPPPGLLGKLSRMLSSGSYKASSAHPAGFSADLEMAFGWDDRADQASADGSGAVDGRGAPPTTRLAGEEAASTGATKWSQEGCGVNELPVFSLCEPSADSVLASHPSSLSVPDGGQRAVRVYVAVEPPGAEPTSAASLTRHVLLYRDPQPDLTICNRSADTVTLLLDCGALVEVAPGGTVEHSWRKEPTTRDANDSNXXXXXXX--------------------------------------------------------------------TGAALDARRSCVSGPGGSPALRKAARAPGKLGGDATLQHWFQCKGGAKGDVFLSWSDPLWVARGVQILRFDGQIGSNEESWGHRGIAEGGSGEDGGXXXDGREGFGTGSAREVQVHVVERAGGFVMSFAEGGFEGAATDGVGVVDSGARDNHHLESRGVLGRWASTLEQHVVVTVSGVSLQLLDDSNLQAVAANGQGGKSMVAAARAASDRLGGMDGWVGGTWAEPGGLPSDGASAHLPAAAIPAIVSVFVDASSVRLWRASPA 1398
            M  EGESLLSPFRPIASGAVDV+GAVVS+SVTAMQCI+QCIAELTR+PSDE       T AEAKPSVVAVP PVPP R+PRQRSKRYIITNHTDRNLWFGQVSTTETLFLRAGEETLYRWRTIP TLAAGAAGRKGDDASRLVLMLRLALHRVSGSGGGYAGAGSE GG YGAWTEPFPVDHVGTFK                       +ESD VTLPLWVEV KNGLETRIAFHGEWVFTNHLPQEIQVAWVTSAGVGNAGRCLVEP GTRGGLSL AC+TSGRA G+LHPVSCSALTASSSS G GQA   RLSELMLEFRLSTPDAAAFVGSVGPPPVATED  GHPAAARDA G GDGGSYDRRGLDDELLQGREEIEVDSSGSPWEVTRQSEWVQARPFVFLALISCASTDPGISGFAFWCVASRQAS A NGHRGNLGQMRIDLHPMALVWNGSSIPMRAVLKHRSGGGGWPEQPPATLAEAVDEQGGAG GH ADRNDDPRANYSLSRTTSAI PGGRTAVCQRPFVDYDLAVASTGTAA QA+PFLVSVPAELLSRRCESTWLPLHSRALSDN+LSPLVVVASRLLDANWPSLSLRVYSGLSVENH SVPLSLRADFIRPLLGSDGEPSAQQPAEAPVTERGEPERAQTE          LLR RGSESVSVDGGG +AGSGRRAVARVSR+FRAGAESC SAWDMFHG EGFSIPFLLPHVSLDIGLDSREE SPSPATAS  AGWSSLVPPGRSA+EVPGGPTPPTPAERRSRKLKVSLAEELNELVLVPWEASSGVVLPVLATLEREVVLGGVELIRLALYPRVVVHNATGVPVSLSLLGGAH AAED K+GGGARNEALPMCRV LTP+GSGSR+NLLAIPGERALPGLD S HG P+SAAGR EG RAG GRGFPLEN P PGLLG+LSR+LSSGSYKASSAHPAGFSADLEMAFGWDDRADQASA  SGAVDGRGAPPT R AG EAASTGATKWSQ+GCG NELPVFSLCEPSA S LASHPSSL+VP GGQRAVRVY+AVEPPGAEPTSAA L RHVL+YRDPQPDLTICNRS DTVTLLLDCGALVEVAPGGTVEHSWRKEPT RDAN SN XXXXXX                                                                    TGAALDARRSCVSGPGGSPALRKAARAPGKLGGDATLQHWFQCKGGAKGDVFLSWSDPLWVARGVQ+LRFDGQ GSNEESWGHRGIAEGGSGE GG   DGR+GFGTGSAREVQVHVVERAGGFVMSFAEGGFEGAA D VGVV+SGARDNHHLESRGVLGRWASTL QHVVVTVSGVSLQLLDDSNLQA AANGQGG S  AAARAASDRLGGMDGWVGGTWAEPGGLPSDGASAHLPAAAIPAIVSVFVDASSVRLWRA+PA
Sbjct: 2714 MAAEGESLLSPFRPIASGAVDVNGAVVSMSVTAMQCIDQCIAELTRKPSDEPATRRSTTAAEAKPSVVAVPTPVPPSRRPRQRSKRYIITNHTDRNLWFGQVSTTETLFLRAGEETLYRWRTIPRTLAAGAAGRKGDDASRLVLMLRLALHRVSGSGGGYAGAGSERGGWYGAWTEPFPVDHVGTFK-----------------------EESDLVTLPLWVEVDKNGLETRIAFHGEWVFTNHLPQEIQVAWVTSAGVGNAGRCLVEPTGTRGGLSLEACSTSGRADGSLHPVSCSALTASSSSLGTGQAQGGRLSELMLEFRLSTPDAAAFVGSVGPPPVATEDLGGHPAAARDADGLGDGGSYDRRGLDDELLQGREEIEVDSSGSPWEVTRQSEWVQARPFVFLALISCASTDPGISGFAFWCVASRQASRAANGHRGNLGQMRIDLHPMALVWNGSSIPMRAVLKHRSGGGGWPEQPPATLAEAVDEQGGAGTGHTADRNDDPRANYSLSRTTSAIRPGGRTAVCQRPFVDYDLAVASTGTAACQAAPFLVSVPAELLSRRCESTWLPLHSRALSDNILSPLVVVASRLLDANWPSLSLRVYSGLSVENHTSVPLSLRADFIRPLLGSDGEPSAQQPAEAPVTERGEPERAQTEXXXXXXXXXXLLRRRGSESVSVDGGGGDAGSGRRAVARVSRMFRAGAESCHSAWDMFHGSEGFSIPFLLPHVSLDIGLDSREEASPSPATASVRAGWSSLVPPGRSADEVPGGPTPPTPAERRSRKLKVSLAEELNELVLVPWEASSGVVLPVLATLEREVVLGGVELIRLALYPRVVVHNATGVPVSLSLLGGAHVAAED-KSGGGARNEALPMCRVRLTPEGSGSRMNLLAIPGERALPGLDASHHGFPQSAAGR-EGERAGEGRGFPLENVPRPGLLGRLSRILSSGSYKASSAHPAGFSADLEMAFGWDDRADQASAADSGAVDGRGAPPTARPAGNEAASTGATKWSQDGCGANELPVFSLCEPSAGSSLASHPSSLTVPGGGQRAVRVYIAVEPPGAEPTSAAPLARHVLIYRDPQPDLTICNRSTDTVTLLLDCGALVEVAPGGTVEHSWRKEPT-RDANGSNGXXXXXXXXXXXXXXXXXXXXXXXXASMTGRHSRRWSEDSRGVVDTPTPMSSAPSSPVQARPGTAAXXXXXXXXXTGAALDARRSCVSGPGGSPALRKAARAPGKLGGDATLQHWFQCKGGAKGDVFLSWSDPLWVARGVQVLRFDGQNGSNEESWGHRGIAEGGSGEGGGGRDDGRKGFGTGSAREVQVHVVERAGGFVMSFAEGGFEGAAADCVGVVESGARDNHHLESRGVLGRWASTLGQHVVVTVSGVSLQLLDDSNLQAFAANGQGGNSTAAAARAASDRLGGMDGWVGGTWAEPGGLPSDGASAHLPAAAIPAIVSVFVDASSVRLWRAAPA 4155          
BLAST of mRNA_Ecto-sp8_S_contig9451.30979.1 vs. uniprot
Match: D8LCN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN3_ECTSI)

HSP 1 Score: 573 bits (1476), Expect = 3.130e-189
Identity = 292/307 (95.11%), Postives = 296/307 (96.42%), Query Frame = 0
Query:  188 RLLRGAEAEGQVGAGASARGAGHQESDFVTLPLWVEVVKNGLETRIAFHGEWVFTNHLPQEIQVAWVTSAGVGNAGRCLVEPAGTRGGLSLGACATSGRAGGALHPVSCSALTASSSSPGAGQAHDERLSELMLEFRLSTPDAAAFVGSVGPPPVATEDSAGHPAAARDAGGFGDGGSYDRRGLDDELLQGREEIEVDSSGSPWEVTRQSEWVQARPFVFLALISCASTDPGISGFAFWCVASRQASSATNGHRGNLGQMRIDLHPMALVWNGSSIPMRAVLKHRSGGGGWPEQPPATLAEAVDEQG 494
            RLLRGAEAEGQVGA ASARGAGHQESDFVTLPLWVEVVKNGLETRIAFHGEWVF N+LPQEIQVAWVTSAGVGNAGRCLVEP GTR GLSL ACATSGRAGG+LHP+SCSALTASSSSPGAGQAH ERLSELMLEFRLSTPDAAA VGSVGPPPVATEDSAGHPAAARDAGGF DGGS+D RGLDDELLQGREEIEVDSSGSPWEVTRQSEWVQARPFVFLALISCASTDPGISGFAFWCVASRQAS A NGHRGNLGQMRIDLHPMALVWNGSSIPMRAVLKHRSGGGGWPEQPPATLAEAVDEQG
Sbjct:   23 RLLRGAEAEGQVGADASARGAGHQESDFVTLPLWVEVVKNGLETRIAFHGEWVFANYLPQEIQVAWVTSAGVGNAGRCLVEPTGTREGLSLEACATSGRAGGSLHPLSCSALTASSSSPGAGQAHGERLSELMLEFRLSTPDAAACVGSVGPPPVATEDSAGHPAAARDAGGFADGGSFDSRGLDDELLQGREEIEVDSSGSPWEVTRQSEWVQARPFVFLALISCASTDPGISGFAFWCVASRQASRAANGHRGNLGQMRIDLHPMALVWNGSSIPMRAVLKHRSGGGGWPEQPPATLAEAVDEQG 329          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9451.30979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE0.000e+085.76VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
D8LCN3_ECTSI3.130e-18995.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9451contigEcto-sp8_S_contig9451:692..6536 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9451.30979.1mRNA_Ecto-sp8_S_contig9451.30979.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9451 171..7177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9451.30979.1 ID=prot_Ecto-sp8_S_contig9451.30979.1|Name=mRNA_Ecto-sp8_S_contig9451.30979.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=1399bp
MVGEGESLLSPFRPIASGAVDVSGAVVSVSVTAMQCIEQCIAELTRRPSD
EPATRPSTTTAEAKPSVVAVPAPVPPPRQPRQRSKRYIITNHTDRNLWFG
QVSTTETLFLRAGEETLYRWRTIPHTLAAGAAGRKGDDASRLVLMLRLAL
HRVSGSGGGYAGAGSEHGGGYGAWTEPFPVDHVGTFKRLLRGAEAEGQVG
AGASARGAGHQESDFVTLPLWVEVVKNGLETRIAFHGEWVFTNHLPQEIQ
VAWVTSAGVGNAGRCLVEPAGTRGGLSLGACATSGRAGGALHPVSCSALT
ASSSSPGAGQAHDERLSELMLEFRLSTPDAAAFVGSVGPPPVATEDSAGH
PAAARDAGGFGDGGSYDRRGLDDELLQGREEIEVDSSGSPWEVTRQSEWV
QARPFVFLALISCASTDPGISGFAFWCVASRQASSATNGHRGNLGQMRID
LHPMALVWNGSSIPMRAVLKHRSGGGGWPEQPPATLAEAVDEQGGAGGGH
AADRNDDPRANYSLSRTTSAIPPGGRTAVCQRPFVDYDLAVASTGTAARQ
ASPFLVSVPAELLSRRCESTWLPLHSRALSDNVLSPLVVVASRLLDANWP
SLSLRVYSGLSVENHLSVPLSLRADFIRPLLGSDGEPSAQQPAEAPVTER
GEPERAQTEEEEEQATAPLLRLRGSESVSVDGGGEAGSGRRAVARVSRIF
RAGAESCLSAWDMFHGLEGFSIPFLLPHVSLDIGLDSREEVSPSPATASA
CAGWSSLVPPGRSAEEVPGGPTPPTPAERRSRKLKVSLAEELNELVLVPW
EASSGVVLPVLATLEREVVLGGVELIRLALYPRVVVHNATGVPVSLSLLG
GAHAAAEDDKTGGGARNEALPMCRVGLTPDGSGSRVNLLAIPGERALPGL
DTSLHGSPRSAAGRGEGGRAGGGRGFPLENDPPPGLLGKLSRMLSSGSYK
ASSAHPAGFSADLEMAFGWDDRADQASADGSGAVDGRGAPPTTRLAGEEA
ASTGATKWSQEGCGVNELPVFSLCEPSADSVLASHPSSLSVPDGGQRAVR
VYVAVEPPGAEPTSAASLTRHVLLYRDPQPDLTICNRSADTVTLLLDCGA
LVEVAPGGTVEHSWRKEPTTRDANDSNGGGGGGGTGAALDARRSCVSGPG
GSPALRKAARAPGKLGGDATLQHWFQCKGGAKGDVFLSWSDPLWVARGVQ
ILRFDGQIGSNEESWGHRGIAEGGSGEDGGGGDDGREGFGTGSAREVQVH
VVERAGGFVMSFAEGGFEGAATDGVGVVDSGARDNHHLESRGVLGRWAST
LEQHVVVTVSGVSLQLLDDSNLQAVAANGQGGKSMVAAARAASDRLGGMD
GWVGGTWAEPGGLPSDGASAHLPAAAIPAIVSVFVDASSVRLWRASPA*
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