prot_Ecto-sp8_S_contig94176.30931.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94176.30931.1
Unique Nameprot_Ecto-sp8_S_contig94176.30931.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length77
Homology
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: A0A6H5LCC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCC1_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 5.510e-48
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKG+SGPHIILVPKSTLSNWLNELKRWCPALR
Sbjct:  265 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGVSGPHIILVPKSTLSNWLNELKRWCPALR 341          
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: D7FV68_ECTSI (Probable chromatin remodelling complex ATPase chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV68_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 2.240e-45
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR
Sbjct:  262 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 338          
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: A0A7S3UY81_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY81_HETAK)

HSP 1 Score: 140 bits (352), Expect = 1.370e-41
Identity = 62/77 (80.52%), Postives = 72/77 (93.51%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            MR YQLEGLNWMIRL +NGINGILADEMGLGKTLQSIS+LAYM EYK ++GPH++L+PKSTLSNW+NE KR+CPA+R
Sbjct:   25 MRPYQLEGLNWMIRLQENGINGILADEMGLGKTLQSISILAYMREYKNVTGPHLVLLPKSTLSNWMNEFKRFCPAIR 101          
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: A0A7S2AX79_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2AX79_9CHLO)

HSP 1 Score: 142 bits (359), Expect = 1.700e-40
Identity = 62/77 (80.52%), Postives = 72/77 (93.51%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            MR YQL+GLNWMI L DNGINGILADEMGLGKTLQSIS+L Y+HEY+GI+GPH+I+VPKSTLSNW+NE++RWCP LR
Sbjct:    6 MREYQLQGLNWMIHLYDNGINGILADEMGLGKTLQSISLLGYLHEYRGITGPHLIIVPKSTLSNWMNEVRRWCPVLR 82          
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: A0A835YGX5_9STRA (Putative chromatin remodelling complex ATPase chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGX5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.630e-39
Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            +RHYQLEGLNWMIRLN NGINGILADEMGLGKTLQSIS+LAYM+E+KGI GPHI+LVPKSTLSNW+NE  RWCP LR
Sbjct:  285 LRHYQLEGLNWMIRLNANGINGILADEMGLGKTLQSISILAYMYEHKGIRGPHIVLVPKSTLSNWMNEFARWCPVLR 361          
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: A0A7S3UXF4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXF4_HETAK)

HSP 1 Score: 135 bits (341), Expect = 3.320e-39
Identity = 61/77 (79.22%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            MR YQLEGLNWMIRL +NGINGILADEMGLGKTLQSIS+L Y  EY+ I GPHI+LVPKSTLSNW+NE +RWCP +R
Sbjct:   25 MRPYQLEGLNWMIRLQENGINGILADEMGLGKTLQSISILGYTMEYRSIRGPHIVLVPKSTLSNWMNEFQRWCPDIR 101          
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: A0A392NA48_9FABA (Putative chromatin-remodeling complex ATPase chain-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NA48_9FABA)

HSP 1 Score: 130 bits (326), Expect = 1.020e-37
Identity = 55/77 (71.43%), Postives = 70/77 (90.91%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            MR YQL GLNW+IRL +NGINGILADEMGLGKTLQ+IS+L Y+HE++GI+GPH+++ PKSTL NW+NE++R+CP LR
Sbjct:    5 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLR 81          
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: A0A830HXB8_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HXB8_9CHLO)

HSP 1 Score: 142 bits (358), Expect = 1.090e-37
Identity = 61/77 (79.22%), Postives = 72/77 (93.51%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            MR YQL+GLNWMI L DNG+NGILADEMGLGKTLQSIS+L Y+HEY+GI+GPH+I+VPKSTLSNW+NE++RWCP LR
Sbjct:  208 MREYQLQGLNWMIHLYDNGVNGILADEMGLGKTLQSISLLGYLHEYRGITGPHLIIVPKSTLSNWMNEVRRWCPVLR 284          
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: A0A7R9U9Y6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9Y6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.070e-37
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            +R YQLEGLNWMIRL+ NGINGILADEMGLGKTLQSI +L YM EYK I GPHI+LVPKSTLSNW+NE  RWCP+LR
Sbjct:  191 LRPYQLEGLNWMIRLHKNGINGILADEMGLGKTLQSICILGYMMEYKNIRGPHIVLVPKSTLSNWMNEFARWCPSLR 267          
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Match: UPI001D1A3ED4 (probable chromatin-remodeling complex ATPase chain n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=UPI001D1A3ED4)

HSP 1 Score: 129 bits (324), Expect = 3.650e-37
Identity = 55/77 (71.43%), Postives = 69/77 (89.61%), Query Frame = 0
Query:    1 MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGISGPHIILVPKSTLSNWLNELKRWCPALR 77
            MR YQL GLNW+IRL +NGINGILADEMGLGKTLQ+IS++ Y+HEY+GI+GPH+++ PKSTL NW+NE+ R+CP LR
Sbjct:    1 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEYRGITGPHMVVAPKSTLGNWMNEIARFCPILR 77          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94176.30931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LCC1_9PHAE5.510e-4898.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV68_ECTSI2.240e-45100.00Probable chromatin remodelling complex ATPase chai... [more]
A0A7S3UY81_HETAK1.370e-4180.52Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2AX79_9CHLO1.700e-4080.52Hypothetical protein (Fragment) n=1 Tax=Pycnococcu... [more]
A0A835YGX5_9STRA2.630e-3985.71Putative chromatin remodelling complex ATPase chai... [more]
A0A7S3UXF4_HETAK3.320e-3979.22Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A392NA48_9FABA1.020e-3771.43Putative chromatin-remodeling complex ATPase chain... [more]
A0A830HXB8_9CHLO1.090e-3779.22Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A7R9U9Y6_9STRA3.070e-3780.52Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
UPI001D1A3ED43.650e-3771.43probable chromatin-remodeling complex ATPase chain... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 16..75
e-value: 1.8E-16
score: 59.8
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..77
e-value: 4.4E-34
score: 119.5
NoneNo IPR availablePANTHERPTHR10799:SF879SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 5coord: 1..77
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 1..77
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 13..77
score: 10.107
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94176contigEcto-sp8_S_contig94176:2..561 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94176.30931.1mRNA_Ecto-sp8_S_contig94176.30931.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94176 2..561 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94176.30931.1 ID=prot_Ecto-sp8_S_contig94176.30931.1|Name=mRNA_Ecto-sp8_S_contig94176.30931.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=77bp
MRHYQLEGLNWMIRLNDNGINGILADEMGLGKTLQSISVLAYMHEYKGIS
GPHIILVPKSTLSNWLNELKRWCPALR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase