prot_Ecto-sp8_S_contig9413.30927.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9413.30927.1
Unique Nameprot_Ecto-sp8_S_contig9413.30927.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length283
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9413.30927.1 vs. uniprot
Match: D7G3N3_ECTSI (Importin alpha-7 subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N3_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 1.230e-97
Identity = 267/290 (92.07%), Postives = 269/290 (92.76%), Query Frame = 0 
Query:    1 MVELEEGNALCKREAAWVFLNMCECSGHPGETIIPEIVGHGVIAAVCENLSSDSDAGKASWEPTLLVMLSLLYTILDEGGLGSTLTLSEYTNLVEEAQGFDKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------QPGCDFKSEKFSPRQPLGTVQQQHLLATGSSSALSPPLSGGVAARGGKRAAAVGGCEGGDME 282
            MVELEEGNALCKREAAWVFLNMCECSG PGETIIPEIVGHGVIAAVCENLSSDSDA       TLLVMLSLLYTILDEGGLGSTLTLSEYT LVEEAQGFDKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        QPGC+FKSEK SPRQPLGTVQQQHLLATGSSSALSP +SGGVAARGGKRA AVGGCE GDME
Sbjct:    1 MVELEEGNALCKREAAWVFLNMCECSGDPGETIIPEIVGHGVIAAVCENLSSDSDA------ETLLVMLSLLYTILDEGGLGSTLTLSEYTTLVEEAQGFDKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPGCNFKSEKNSPRQPLGTVQQQHLLATGSSSALSPRVSGGVAARGGKRADAVGGCEVGDME 284
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BLAST of mRNA_Ecto-sp8_S_contig9413.30927.1 vs. uniprot
Match: A0A6H5KJL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL7_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 7.250e-89
Identity = 245/306 (80.07%), Postives = 251/306 (82.03%), Query Frame = 0 
Query:    1 MVELEEGNALCKREAAWVFLNMCECSGHPGETIIPEIVGHGVIAAVCENLSSDSDAGKASWEP----------------------TLLVMLSLLYTILDEGGLGSTLTLSEYTNLVEEAQGFDKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--QPGCDFKSEKFSPRQPLGTVQQQHLLATGSSSALSPPLSGGVAARGGKRAAAVGGCEGGDME 282
            MVELEEGNALCKREAAWVFLNMCECSG P  TIIPEIVGHGVIAAVCENLSSDSDAGKAS EP                      TLLVMLSLLYTILDEGGLGSTLTLSEYT LVEEAQGFDKI+ LANDHDDMEIYDKAMDIIQAFHDSQ+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  QPGC+FKSE  S RQPLGTV+QQHLLATGSSSAL+PPL+GGVAA G KR AAV GCE GDME
Sbjct:   88 MVELEEGNALCKREAAWVFLNMCECSGDPRATIIPEIVGHGVIAAVCENLSSDSDAGKASREPVDASAKRLPCTPPSTPPRNPAETLLVMLSLLYTILDEGGLGSTLTLSEYTTLVEEAQGFDKIISLANDHDDMEIYDKAMDIIQAFHDSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSEASPIASPTAEQEEEQQPGCNFKSETKSSRQPLGTVRQQHLLATGSSSALAPPLTGGVAAGGRKRTAAVRGCEVGDME 393
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9413.30927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3N3_ECTSI1.230e-9792.07Importin alpha-7 subunit, putative n=1 Tax=Ectocar... [more]
A0A6H5KJL7_9PHAE7.250e-8980.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..136
e-value: 5.1E-15
score: 56.8
IPR032413Atypical Arm repeatPFAMPF16186Arm_3coord: 89..137
e-value: 1.2E-13
score: 50.3
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9413contigEcto-sp8_S_contig9413:5088..7064 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9413.30927.1mRNA_Ecto-sp8_S_contig9413.30927.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9413 5088..7064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9413.30927.1 ID=prot_Ecto-sp8_S_contig9413.30927.1|Name=mRNA_Ecto-sp8_S_contig9413.30927.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=283bp
MVELEEGNALCKREAAWVFLNMCECSGHPGETIIPEIVGHGVIAAVCENL
SSDSDAGKASWEPTLLVMLSLLYTILDEGGLGSTLTLSEYTNLVEEAQGF
DKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDEDDDDDELVFGVAHATAA
AAAATRACAVSSDHDDSSDMMSDDSLSDDSFHRELAGAASGPITPPPAAQ
RRPSEASPIAPPTAEQEEEQQPGCDFKSEKFSPRQPLGTVQQQHLLATGS
SSALSPPLSGGVAARGGKRAAAVGGCEGGDME*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR032413Arm_3
IPR016024ARM-type_fold