prot_Ecto-sp8_S_contig94078.30918.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94078.30918.1
Unique Nameprot_Ecto-sp8_S_contig94078.30918.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length181
Homology
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: A0A3S1GVP4_9HYPH (Excinuclease ABC subunit A (Fragment) n=2 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A3S1GVP4_9HYPH)

HSP 1 Score: 322 bits (826), Expect = 2.160e-109
Identity = 163/181 (90.06%), Postives = 172/181 (95.03%), Query Frame = 0
Query:    1 MAELKTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            MA+ K +S+RGAREHNLKN+D+DLPRD LIV+TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFAR GIPYSPATGLPIESQTVSQMVDRV+ LEEG RLYLLAPIVRGRKGEYRKE+ EL K GFQR+K
Sbjct:    1 MADQKYLSIRGAREHNLKNVDLDLPRDSLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGIPYSPATGLPIESQTVSQMVDRVLALEEGTRLYLLAPIVRGRKGEYRKELLELQKKGFQRVK 181          
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: I5C8J7_9HYPH (Excinuclease ABC subunit A n=1 Tax=Nitratireductor aquibiodomus RA22 TaxID=1189611 RepID=I5C8J7_9HYPH)

HSP 1 Score: 322 bits (826), Expect = 3.750e-108
Identity = 162/181 (89.50%), Postives = 174/181 (96.13%), Query Frame = 0
Query:    1 MAELKTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            M E K+I++RGAREHNLKN+D+DLPR+KLIV+TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTS+NPRSTVGTVTEIYDYMRLLFAR G+PYSPATGLPIESQTVSQMVDRVM LEEG RLY+LAPIVRGRKGEYRKE+AEL K GFQR+K
Sbjct:    1 MPEHKSITIRGAREHNLKNVDLDLPREKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGVPYSPATGLPIESQTVSQMVDRVMALEEGTRLYVLAPIVRGRKGEYRKEMAELQKKGFQRVK 181          
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: U4VBG3_9HYPH (Excinuclease ABC subunit A (Fragment) n=1 Tax=Brucella intermedia 229E TaxID=1337887 RepID=U4VBG3_9HYPH)

HSP 1 Score: 323 bits (829), Expect = 7.790e-108
Identity = 162/181 (89.50%), Postives = 174/181 (96.13%), Query Frame = 0
Query:    1 MAELKTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            M++ K IS+RGAREHNLKN+D+DLPRDKLIV+TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFAR G+PYSPATGLPIESQTVSQMVDRVM +EEG RLY+LAPIVRGRKGEY+KE+AEL K GFQR+K
Sbjct:    1 MSDQKFISIRGAREHNLKNVDLDLPRDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGVPYSPATGLPIESQTVSQMVDRVMAVEEGTRLYILAPIVRGRKGEYKKELAELQKKGFQRVK 181          
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: UPI000FD6C43A (excinuclease ABC subunit UvrA n=1 Tax=Rhizobium meliloti TaxID=382 RepID=UPI000FD6C43A)

HSP 1 Score: 325 bits (833), Expect = 1.110e-106
Identity = 163/181 (90.06%), Postives = 175/181 (96.69%), Query Frame = 0
Query:    1 MAELKTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            M+ELKTIS+RGAREHNLK ID+DLPR+KLIV+TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDY+RLLFAR G+PYSPATGLPIESQTVSQMVDRV+E  EG RLY+LAP+VRGRKGEYRKE+AELMK GFQR+K
Sbjct:    1 MSELKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGVPYSPATGLPIESQTVSQMVDRVLEFGEGTRLYMLAPLVRGRKGEYRKELAELMKKGFQRVK 181          
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: J3CYP9_9BRAD (UvrA_inter domain-containing protein (Fragment) n=1 Tax=Bradyrhizobium sp. YR681 TaxID=1144344 RepID=J3CYP9_9BRAD)

HSP 1 Score: 314 bits (805), Expect = 1.710e-106
Identity = 155/180 (86.11%), Postives = 171/180 (95.00%), Query Frame = 0
Query:    2 AELKTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            + L+ I++RGAREHNLKN+DV++PRDKL+V TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTS+NPRSTVGTVTEIYDYMRLL+AR G+PYSPATGLPIESQTVSQMVDRV+ L EG RLYLLAP+VRGRKGEYRKE+AE +K GFQR+K
Sbjct:   16 SSLRAITIRGAREHNLKNVDVEIPRDKLVVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGVPYSPATGLPIESQTVSQMVDRVLALPEGTRLYLLAPVVRGRKGEYRKELAEWLKKGFQRVK 195          
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: A0A8J4ZQB6_9CHEL (UvrABC system protein A n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZQB6_9CHEL)

HSP 1 Score: 322 bits (826), Expect = 2.550e-106
Identity = 162/181 (89.50%), Postives = 175/181 (96.69%), Query Frame = 0
Query:    1 MAELKTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            M++ K ISVRGAREHNLKN+D+DLPR+KLIV+TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTS+NPRSTVGTVTEIYDYMRLLFAR GIPYSPATGLPIESQTVSQMVDRV+ LEEG RLY+LAPIV+GRKGEY+KE+AELMK GFQR+K
Sbjct:   16 MSDSKFISVRGAREHNLKNVDIDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGIPYSPATGLPIESQTVSQMVDRVLALEEGTRLYILAPIVQGRKGEYKKELAELMKKGFQRVK 196          
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: A0A833G354_9HYPH (Excinuclease ABC subunit A (Fragment) n=1 Tax=Bauldia sp. TaxID=2575872 RepID=A0A833G354_9HYPH)

HSP 1 Score: 322 bits (825), Expect = 5.580e-106
Identity = 162/181 (89.50%), Postives = 173/181 (95.58%), Query Frame = 0
Query:    1 MAELKTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            MA+ K IS+RGAREHNLKNID+DLPRD+LIV+TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTS+NPRSTVGTVTEIYDYMRLLFAR G+PYSPATGLPIESQTVSQMVDRV+ LEEG RLY+ APIVRGRKGEYRKE+AEL K GFQR+K
Sbjct:    1 MADQKFISIRGAREHNLKNIDLDLPRDRLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLFARVGVPYSPATGLPIESQTVSQMVDRVLALEEGTRLYITAPIVRGRKGEYRKELAELQKKGFQRVK 181          
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: A0A6N6STI8_9HYPH (Excinuclease ABC subunit A (Fragment) n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6STI8_9HYPH)

HSP 1 Score: 312 bits (799), Expect = 1.550e-105
Identity = 157/177 (88.70%), Postives = 167/177 (94.35%), Query Frame = 0
Query:    5 KTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            KTI VRGAREHNLKNID+++PRD LIV TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVD IDGLSPAISIEQKTTS+NPRSTVGTVTEIYDY+RLLFAR G+PYSPATGLPIESQTV+QMVDRV+ L EG RLYLLAPIVRGRKGEYRKE+AEL K GFQR+K
Sbjct:    8 KTIHVRGAREHNLKNIDLEIPRDALIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDHIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARVGVPYSPATGLPIESQTVTQMVDRVLALPEGTRLYLLAPIVRGRKGEYRKELAELQKKGFQRVK 184          
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: A0A849E9D2_9HYPH (Excinuclease ABC subunit A (Fragment) n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849E9D2_9HYPH)

HSP 1 Score: 318 bits (815), Expect = 2.080e-105
Identity = 163/182 (89.56%), Postives = 173/182 (95.05%), Query Frame = 0
Query:    1 MAELKTI-SVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            MAE K I SV+GAREHNLKN+ ++LPRDKLIV TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFAR GI YSPATGLPI+SQTV+QMVDRVME+E+GARLYLLAPI+RGRKGEYRKE AELMK GFQR+K
Sbjct:    1 MAETKRIISVQGAREHNLKNVSIELPRDKLIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGIAYSPATGLPIQSQTVTQMVDRVMEIEDGARLYLLAPIIRGRKGEYRKEFAELMKKGFQRVK 182          
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Match: A0A528XKM4_9HYPH (Excinuclease ABC subunit A (Fragment) n=4 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A528XKM4_9HYPH)

HSP 1 Score: 321 bits (822), Expect = 2.880e-105
Identity = 162/181 (89.50%), Postives = 172/181 (95.03%), Query Frame = 0
Query:    1 MAELKTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGARLYLLAPIVRGRKGEYRKEIAELMKAGFQRLK 181
            MA+ K +S+RGAREHNLKN+D+DLPRD LIV+TGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFAR GIPYSPATGLPIESQTVSQMVDRV+ L+EG RLYLLAPIVRGRKGEYRKE+ EL K GFQR+K
Sbjct:    1 MADHKYLSIRGAREHNLKNVDLDLPRDSLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGIPYSPATGLPIESQTVSQMVDRVLALDEGTRLYLLAPIVRGRKGEYRKELLELQKKGFQRVK 181          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94078.30918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S1GVP4_9HYPH2.160e-10990.06Excinuclease ABC subunit A (Fragment) n=2 Tax=uncl... [more]
I5C8J7_9HYPH3.750e-10889.50Excinuclease ABC subunit A n=1 Tax=Nitratireductor... [more]
U4VBG3_9HYPH7.790e-10889.50Excinuclease ABC subunit A (Fragment) n=1 Tax=Bruc... [more]
UPI000FD6C43A1.110e-10690.06excinuclease ABC subunit UvrA n=1 Tax=Rhizobium me... [more]
J3CYP9_9BRAD1.710e-10686.11UvrA_inter domain-containing protein (Fragment) n=... [more]
A0A8J4ZQB6_9CHEL2.550e-10689.50UvrABC system protein A n=1 Tax=Nymphon striatum T... [more]
A0A833G354_9HYPH5.580e-10689.50Excinuclease ABC subunit A (Fragment) n=1 Tax=Baul... [more]
A0A6N6STI8_9HYPH1.550e-10588.70Excinuclease ABC subunit A (Fragment) n=1 Tax=Hyph... [more]
A0A849E9D2_9HYPH2.080e-10589.56Excinuclease ABC subunit A (Fragment) n=1 Tax=Ande... [more]
A0A528XKM4_9HYPH2.880e-10589.50Excinuclease ABC subunit A (Fragment) n=4 Tax=uncl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.190.20coord: 128..181
e-value: 2.0E-15
score: 58.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..117
e-value: 2.1E-27
score: 98.0
NoneNo IPR availablePANTHERPTHR43152FAMILY NOT NAMEDcoord: 5..180
NoneNo IPR availablePANTHERPTHR43152:SF3UVRABC SYSTEM PROTEIN Acoord: 5..180
IPR041102UvrA, interaction domainPFAMPF17760UvrA_intercoord: 133..180
e-value: 6.3E-14
score: 52.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94078contigEcto-sp8_S_contig94078:59..601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94078.30918.1mRNA_Ecto-sp8_S_contig94078.30918.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94078 59..601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94078.30918.1 ID=prot_Ecto-sp8_S_contig94078.30918.1|Name=mRNA_Ecto-sp8_S_contig94078.30918.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=181bp
MAELKTISVRGAREHNLKNIDVDLPRDKLIVITGLSGSGKSSLAFDTIYA
EGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRST
VGTVTEIYDYMRLLFARAGIPYSPATGLPIESQTVSQMVDRVMELEEGAR
LYLLAPIVRGRKGEYRKEIAELMKAGFQRLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041102UvrA_inter
IPR027417P-loop_NTPase