prot_Ecto-sp8_S_contig94040.30911.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94040.30911.1
Unique Nameprot_Ecto-sp8_S_contig94040.30911.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length41
Homology
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: D7FUP3_ECTSI (Proline--tRNA ligase, central part n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP3_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 8.260e-19
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
Query:    1 ERELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 41
            +RELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV
Sbjct:  351 KRELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 391          
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: A0A0M0J5Q8_9EUKA (Prolyl-tRNA synthetase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J5Q8_9EUKA)

HSP 1 Score: 74.3 bits (181), Expect = 7.430e-15
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 ERELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 41
            +RELVWATSWGV+TRL+GA+VMTHSDD GL LPPAVAP QV
Sbjct:   33 QRELVWATSWGVSTRLIGALVMTHSDDAGLVLPPAVAPTQV 73          
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: A0A835Z2K2_9STRA (Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K2_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.600e-14
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 ERELVWATSWGVTTRLMGAMVMTHSDDFGLR--LPPAVAPKQV 41
            +RELVWATSWGV+TRLMGA+VMTHSDD GLR  LPPAVAP QV
Sbjct:  404 DRELVWATSWGVSTRLMGALVMTHSDDAGLRQQLPPAVAPHQV 446          
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: A0A5J4YUG4_PORPP (Proline--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUG4_PORPP)

HSP 1 Score: 73.6 bits (179), Expect = 3.560e-14
Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 ERELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 41
            +RELVWATSWGV+TRLMGA++MTHSDD GL LPP+VAP QV
Sbjct:  360 KRELVWATSWGVSTRLMGALIMTHSDDTGLVLPPSVAPVQV 400          
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: A0A7S2SII9_9STRA (Proline--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SII9_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.560e-14
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 0
Query:    1 ERELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 41
            +RELVWATSWGV+TRL+GAMVMTH+DD GL LPPAVAP QV
Sbjct:  347 KRELVWATSWGVSTRLVGAMVMTHADDAGLVLPPAVAPVQV 387          
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: A0A7S0W9N9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W9N9_9CRYP)

HSP 1 Score: 69.7 bits (169), Expect = 6.900e-14
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    1 ERELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 41
            + ELVWATSWGV+TRL+GA+VMTHSDD GL LPP VAP QV
Sbjct:   68 KNELVWATSWGVSTRLLGALVMTHSDDQGLVLPPMVAPVQV 108          
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: UPI0008387A80 (proline--tRNA ligase n=1 Tax=Vaginella massiliensis TaxID=1816680 RepID=UPI0008387A80)

HSP 1 Score: 72.0 bits (175), Expect = 1.240e-13
Identity = 31/41 (75.61%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 ERELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 41
            ++E VWATSWGV+TRLMGA++MTHSDDFGL LPP +AP QV
Sbjct:  262 KQEFVWATSWGVSTRLMGALIMTHSDDFGLVLPPKIAPIQV 302          
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: F0XWH9_AURAN (Proline--tRNA ligase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWH9_AURAN)

HSP 1 Score: 72.0 bits (175), Expect = 1.240e-13
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 ERELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 41
            +RELVWATSWGV+TRL+GA+VMTHSDD GL LPP VAP QV
Sbjct:  372 KRELVWATSWGVSTRLLGALVMTHSDDAGLVLPPRVAPVQV 412          
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: W7TTB8_9STRA (Proline--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTB8_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.690e-13
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:    2 RELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 41
            RELVWATSWGV+TRL+GA+VMTHSDD GL LPP+VAP QV
Sbjct:  447 RELVWATSWGVSTRLIGALVMTHSDDKGLVLPPSVAPVQV 486          
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Match: UPI001E1E13D6 (LOW QUALITY PROTEIN: proline--tRNA ligase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E13D6)

HSP 1 Score: 71.2 bits (173), Expect = 2.300e-13
Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 0
Query:    3 ELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV 41
            ELVWATSWGVTTRL+GA++MTHSDD GL LPP+VAP QV
Sbjct:  232 ELVWATSWGVTTRLVGALIMTHSDDTGLVLPPSVAPVQV 270          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94040.30911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP3_ECTSI8.260e-1997.56Proline--tRNA ligase, central part n=1 Tax=Ectocar... [more]
A0A0M0J5Q8_9EUKA7.430e-1582.93Prolyl-tRNA synthetase n=1 Tax=Chrysochromulina to... [more]
A0A835Z2K2_9STRA2.600e-1483.72Proline--tRNA ligase n=1 Tax=Tribonema minus TaxID... [more]
A0A5J4YUG4_PORPP3.560e-1480.49Proline--tRNA ligase n=1 Tax=Porphyridium purpureu... [more]
A0A7S2SII9_9STRA3.560e-1482.93Proline--tRNA ligase n=1 Tax=Rhizochromulina marin... [more]
A0A7S0W9N9_9CRYP6.900e-1478.05Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
UPI0008387A801.240e-1375.61proline--tRNA ligase n=1 Tax=Vaginella massiliensi... [more]
F0XWH9_AURAN1.240e-1380.49Proline--tRNA ligase n=1 Tax=Aureococcus anophagef... [more]
W7TTB8_9STRA1.690e-1382.50Proline--tRNA ligase n=2 Tax=Monodopsidaceae TaxID... [more]
UPI001E1E13D62.300e-1382.05LOW QUALITY PROTEIN: proline--tRNA ligase-like n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.930.10coord: 1..33
e-value: 5.2E-8
score: 34.8
NoneNo IPR availablePANTHERPTHR43382FAMILY NOT NAMEDcoord: 2..41
NoneNo IPR availablePANTHERPTHR43382:SF3PROLINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIALcoord: 2..41
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 5..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94040contigEcto-sp8_S_contig94040:75..197 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94040.30911.1mRNA_Ecto-sp8_S_contig94040.30911.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94040 75..197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94040.30911.1 ID=prot_Ecto-sp8_S_contig94040.30911.1|Name=mRNA_Ecto-sp8_S_contig94040.30911.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=41bp
ERELVWATSWGVTTRLMGAMVMTHSDDFGLRLPPAVAPKQV
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