prot_Ecto-sp8_S_contig94031.30909.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94031.30909.1
Unique Nameprot_Ecto-sp8_S_contig94031.30909.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length60
Homology
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BLAST of mRNA_Ecto-sp8_S_contig94031.30909.1 vs. uniprot
Match: D7G934_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G934_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.050e-16
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 0 
Query:   19 SAYVKLSHPDVRTVYMIGEEGLEEELEMVGLRVVKEEARPAP 60
            +AYVKLSHPDV+TVYMIGEEGLEEELEMVGLRVVKEEARPAP
Sbjct:  104 AAYVKLSHPDVQTVYMIGEEGLEEELEMVGLRVVKEEARPAP 145
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94031.30909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G934_ECTSI1.050e-1695.24Haloacid dehalogenase-like hydrolase family protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 12..60
e-value: 4.3E-6
score: 28.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..60
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.845

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94031contigEcto-sp8_S_contig94031:65..244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94031.30909.1mRNA_Ecto-sp8_S_contig94031.30909.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94031 65..244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94031.30909.1 ID=prot_Ecto-sp8_S_contig94031.30909.1|Name=mRNA_Ecto-sp8_S_contig94031.30909.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=60bp
MQTRLSFLLLIVFVARCCSAYVKLSHPDVRTVYMIGEEGLEEELEMVGLR
VVKEEARPAP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf