prot_Ecto-sp8_S_contig93947.30891.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig93947.30891.1
Unique Nameprot_Ecto-sp8_S_contig93947.30891.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length48
Homology
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: D8LM34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM34_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 1.440e-22
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
Query:    1 RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERS 48
            RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERS
Sbjct: 1065 RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERS 1112          
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: A0A836CLB4_9STRA (Non-SMC mitotic condensation complex subunit 1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB4_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.840e-11
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 0
Query:    1 RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTL 45
            R+VA+E G FGHPL+RES+VLAL+K+MC+S A CER L LLFT L
Sbjct: 1136 RIVANEDGAFGHPLLRESAVLALAKYMCVSAAACERYLPLLFTAL 1180          
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: A0A1V9YNA9_9STRA (Condensin complex subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNA9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 5.100e-9
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERS 48
            RLVA+E G F   ++RE++++AL KFMCIS  FCE+NL L+FT L+ S
Sbjct:  920 RLVANEDGAFDDEMIRETAIVALCKFMCISSDFCEKNLPLVFTKLKES 967          
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: A0A1V9YJJ7_9STRA (Condensin complex subunit (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YJJ7_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.300e-8
Identity = 26/48 (54.17%), Postives = 37/48 (77.08%), Query Frame = 0
Query:    1 RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERS 48
            R+VA+E G F   +V+E++++AL KFMCIS  FCE+NL L+FT L+ S
Sbjct: 1132 RMVANEDGVFDDEMVKETAIVALCKFMCISATFCEKNLPLIFTRLKES 1179          
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: A0A1Z5JXY1_FISSO (Condensin complex subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXY1_FISSO)

HSP 1 Score: 57.0 bits (136), Expect = 3.340e-8
Identity = 26/48 (54.17%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERS 48
            R+VA++GG F   ++ E+SVLAL+KFMC+S  FCE++L LLFT L ++
Sbjct:  921 RVVANDGGRFESKILMEASVLALTKFMCVSSHFCEKHLPLLFTALSKA 968          
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: A0A7S3MAC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAC1_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 9.890e-8
Identity = 25/46 (54.35%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    2 LVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLER 47
            +VA+E   F HPL+RE+S+LAL ++MC S   C++ L LLFT LER
Sbjct:    4 MVANEQKKFSHPLLRETSILALCRYMCTSSVVCDQLLPLLFTVLER 49          
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: A0A7S4MY57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MY57_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.180e-7
Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTL 45
            R+V +EGG F   ++ +S+ LAL KFMCIS AFCE++L LLF+ L
Sbjct:  791 RVVGNEGGIFNSEILMQSATLALCKFMCISSAFCEKHLPLLFSAL 835          
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: A0A507BT70_9FUNG (Condensin complex subunit 1 n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BT70_9FUNG)

HSP 1 Score: 53.5 bits (127), Expect = 5.590e-7
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    3 VADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERS 48
            +      + HPL++  +VLALSKFMC+S  FC+ NL LL T LERS
Sbjct:  964 ICKHNSTYSHPLLQTHAVLALSKFMCVSSDFCDSNLQLLLTILERS 1009          
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: A0A1E7FUA7_9STRA (ARM repeat-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FUA7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.430e-6
Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTL 45
            R+VA+EG  F   ++R++S LAL KFMC+S +FCE++L ++FT L
Sbjct:  888 RVVANEGDKFNSEILRQTSTLALCKFMCVSSSFCEQHLPVVFTAL 932          
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Match: A0A507CTP5_9FUNG (Condensin complex subunit 1 n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CTP5_9FUNG)

HSP 1 Score: 50.8 bits (120), Expect = 5.010e-6
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0
Query:    3 VADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERS 48
            +  +   F  PL++  +VLALSKFMC+S  FC+ NL LL T LE+S
Sbjct:  987 ICKQNSHFSSPLLQTHAVLALSKFMCVSSEFCDSNLQLLLTVLEKS 1032          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig93947.30891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM34_ECTSI1.440e-22100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLB4_9STRA1.840e-1168.89Non-SMC mitotic condensation complex subunit 1-dom... [more]
A0A1V9YNA9_9STRA5.100e-956.25Condensin complex subunit n=1 Tax=Achlya hypogyna ... [more]
A0A1V9YJJ7_9STRA1.300e-854.17Condensin complex subunit (Fragment) n=1 Tax=Thrau... [more]
A0A1Z5JXY1_FISSO3.340e-854.17Condensin complex subunit 1 n=2 Tax=Fistulifera so... [more]
A0A7S3MAC1_9STRA9.890e-854.35Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S4MY57_9STRA2.180e-755.56Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A507BT70_9FUNG5.590e-752.17Condensin complex subunit 1 n=1 Tax=Synchytrium mi... [more]
A0A1E7FUA7_9STRA1.430e-651.11ARM repeat-containing protein n=1 Tax=Fragilariops... [more]
A0A507CTP5_9FUNG5.010e-650.00Condensin complex subunit 1 n=1 Tax=Synchytrium en... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026971Condensin subunit 1/Condensin-2 complex subunit D3PANTHERPTHR14222CONDENSINcoord: 10..48
IPR007673Condensin subunit 1PANTHERPTHR14222:SF2CONDENSIN COMPLEX SUBUNIT 1coord: 10..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig93947contigEcto-sp8_S_contig93947:298..441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig93947.30891.1mRNA_Ecto-sp8_S_contig93947.30891.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig93947 298..441 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig93947.30891.1 ID=prot_Ecto-sp8_S_contig93947.30891.1|Name=mRNA_Ecto-sp8_S_contig93947.30891.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=48bp
RLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026971CND1/NCAPD3
IPR007673Condensin_cplx_su1