prot_Ecto-sp8_S_contig9383.30870.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9383.30870.1
Unique Nameprot_Ecto-sp8_S_contig9383.30870.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length36
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9383.30870.1 vs. uniprot
Match: D7FJQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ0_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 5.870e-15
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 0 
Query:    1 KLVPSNVKPFDRFGASVSIDGDALIVGSHQDFEEGN 36
            KLVPSN+KPFDRFGASVSIDGDALIVGSHQDFEEGN
Sbjct: 2435 KLVPSNLKPFDRFGASVSIDGDALIVGSHQDFEEGN 2470
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9383.30870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJQ0_ECTSI5.870e-1597.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013517FG-GAP repeatPFAMPF14312FG-GAP_2coord: 1..32
e-value: 3.8E-9
score: 36.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9383contigEcto-sp8_S_contig9383:6276..6383 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9383.30870.1mRNA_Ecto-sp8_S_contig9383.30870.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9383 6276..6383 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9383.30870.1 ID=prot_Ecto-sp8_S_contig9383.30870.1|Name=mRNA_Ecto-sp8_S_contig9383.30870.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=36bp
KLVPSNVKPFDRFGASVSIDGDALIVGSHQDFEEGN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013517FG-GAP