prot_Ecto-sp8_S_contig9380.30867.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9380.30867.1
Unique Nameprot_Ecto-sp8_S_contig9380.30867.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length284
Homology
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: A0A6H5KAT5_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT5_9PHAE)

HSP 1 Score: 508 bits (1308), Expect = 6.290e-171
Identity = 249/286 (87.06%), Postives = 260/286 (90.91%), Query Frame = 0
Query:    2 VAEDEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLWWRKWPPYVTKNVDVVIISTFSGVLWNVAMIIASGYIRREAG---DILAACDFERFLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIFYPLLTTYILLWGSIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQVR 284
            +AEDEVWEPLSTPDFWVLGFVATFQ VALLVCAHLL WRKWPPYVTKNVDVVIIS             A+    R+ G   DILAACDFERFLSWSTLCVHTV+FFIRVYRMWRILIKHDD+MWHTGHQILFMSSLSLIPVVATWAVPHTGYFDE ANTCSTTTFS +VVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYE MKRTLLYMTITLASYGVIVVYLLAD+LVLGRRVS+FYPLLTTYILLWGSIREPFMMKI+GDDEYLWSYTKGFAQLPSPAQ++
Sbjct:    1 MAEDEVWEPLSTPDFWVLGFVATFQTVALLVCAHLLRWRKWPPYVTKNVDVVIIS-------------AARLPTRQPGRPGDILAACDFERFLSWSTLCVHTVAFFIRVYRMWRILIKHDDQMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEVANTCSTTTFSTIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTITLASYGVIVVYLLADNLVLGRRVSVFYPLLTTYILLWGSIREPFMMKILGDDEYLWSYTKGFAQLPSPAQLK 273          
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: D7FIR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR8_ECTSI)

HSP 1 Score: 473 bits (1217), Expect = 8.240e-168
Identity = 229/238 (96.22%), Postives = 233/238 (97.90%), Query Frame = 0
Query:    1 MVAEDEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLWWRKWPPYVTKNVDVVIISTFSGVLWNVAMIIASGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIF 238
            M AE EVWEPLSTPDFWVLGFVATFQAVALLVCAHLL WRKWPPYVTKNVDVVIISTFSGVLWNV+MII+SGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYR WRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSA+VVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYE MKRTLLYMT+TLASYGVIVVYLLADDLVLGRRVSIF
Sbjct:    1 MEAEGEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLRWRKWPPYVTKNVDVVIISTFSGVLWNVSMIISSGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRTWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAIVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYETMKRTLLYMTVTLASYGVIVVYLLADDLVLGRRVSIF 238          
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: D7FTZ6_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ6_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 4.700e-111
Identity = 161/267 (60.30%), Postives = 197/267 (73.78%), Query Frame = 0
Query:   18 VLGFVATFQAVALLVCAHLLWWRKWPPYVTKNVDVVIISTFSGVLWNVAMIIASGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIFYPLLTTYILLWGSIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQVR 284
            +LG V TFQA AL VC HL+ WRKWPPYVTKNVD+VII T +G  W  A  + SG I R  GD LA C  +  LSWSTL VH +SF +RVYRMWRILIKHDD MW   +Q++ MSS+SL P++A   VP   +FDE  N+C+TTT S  VVL M+ALGF  ICYLWFVC RQL+WVRKQFNEYEAMK TL  +T+ L SY  +V  +L +  VL RRV+I YP+L+TY LLWGS+ EP + K  GD+ YLWS+TKGF+++PSPAQ++
Sbjct:    1 MLGMVGTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALQSGLIPRNEGDFLAICYIDTTLSWSTLAVHIMSFAVRVYRMWRILIKHDDSMWPAKYQVMVMSSISLGPLLAAVLVPDLHFFDETVNSCNTTTDSRNVVLAMNALGFYLICYLWFVCTRQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIILNNQHVLVRRVAIVYPVLSTYTLLWGSVGEPVVKKFTGDEGYLWSFTKGFSEMPSPAQLK 267          
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: A0A6H5JJQ0_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ0_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 2.220e-108
Identity = 161/311 (51.77%), Postives = 204/311 (65.59%), Query Frame = 0
Query:    2 VAEDEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLWWRKWPPYVTKNVDVVIISTFSGVLWNVAMIIASGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLW----------------------------FVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIFYPLLTTYILLWGSIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQVR 284
            ++++EVWEPL+  D+ +LGFV T QA AL VC HLL WR WPPYVTKNVD+VI+ TF G  W +++ + +G  RR  GDILA C  ER L+W  LC H  +FFIRVYRMWRIL+KHD+ MW   +QI+ +SS+SL P +    VP    FDE  N C+TT+ S  V L M+A+GF  ICY+W                            FVC RQL+WVRKQFNEYE MK TL  +T+ L SY V+VV +L    V+ RRV+I YP LTT+ +LWGSI EP + K   D+EYLWS+TKGF+ LPSPAQ++
Sbjct:    1 MSDEEVWEPLTMVDYIMLGFVGTVQAFALGVCVHLLSWRHWPPYVTKNVDIVIVMTFGGFGWTISVALDNGLFRRSEGDILAKCYLERLLAWPALCTHMFAFFIRVYRMWRILVKHDENMWPAKYQIMLLSSISLTPALVALLVPGAYVFDETVNLCTTTSTSRTVTLAMNAVGFYTICYIWWRQSYVHVPATGLMRAVCALVSLAAKTRFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYAVVVVVVLDGQHVIVRRVAIVYPALTTHTVLWGSIGEPVLKKWTRDEEYLWSFTKGFSDLPSPAQLK 311          
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: D7FTZ9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ9_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 5.770e-105
Identity = 152/284 (53.52%), Postives = 205/284 (72.18%), Query Frame = 0
Query:    2 VAEDEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLWWRKWPPYVTKNVDVVIISTFSGVLWNVAMIIASGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDL-VLGRRVSIFYPLLTTYILLWGSIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQVR 284
            ++++E+WEPL+  D+ +LG V TFQA+AL VC HL  WR WPPYVTKNVD+VII TF+G  W  A  +  G++ R  GD+LA C  E+ L+WSTLC+H  +FFIRVY MWRI+++HD+ +     QI  +SS+SL+P +    VP    FDE  N+C+TT+ S  V LGM+A+GF  IC+LWFVC RQL+ VRKQFNEYEA+K TL  + + + SY V V  +L +   VL RR++I YP+LTT+ LLWGSI EP + K  GD EYLWS+T+GF+++PSPAQ++
Sbjct:    1 MSDEELWEPLTMVDYLMLGIVGTFQALALGVCVHLFLWRNWPPYVTKNVDIVIIMTFAGFAWTFANALDVGFVHRSKGDLLAECSLEKLLTWSTLCIHMFAFFIRVYLMWRIMVRHDEDVGSPKGQIFLLSSISLVPPLIALLVPGAYVFDETINSCNTTSTSRTVGLGMNAVGFYTICFLWFVCGRQLRRVRKQFNEYEAIKWTLSCLILLVLSYTVGVNIILDNKHHVLARRLAIVYPVLTTHTLLWGSIGEPLLKKWEGDREYLWSFTRGFSEMPSPAQLK 284          
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: A0A6H5K025_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K025_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 1.360e-95
Identity = 166/408 (40.69%), Postives = 207/408 (50.74%), Query Frame = 0
Query:    2 VAEDEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLWWRKWPPYVTKNVDVVII-----------------------------------------------------------------------------------------------------STFSGVLWNVAMIIASGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHTG--------------------------HQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIFYPLLTTYILLWGSIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQ 282
            +++ EVWEPL+  D+ +LGFV T Q  AL VC HLL WR WPPYVTKNVD+VI+                                                                                                      TF+G  W +A  + +G IRR  GD+LA C  ERFL+WS LC H  +FFIRVYRMWRIL+KHDD MW                             +QI+ +SS+SL+P +    VP    FDE  N+C+TT+ S  VVL M+ +GF  +CYLWFVC RQL+WVRKQFNEYE MK TL  +T+ L SY V+VV +L +  V  RRV+I YP LTT+ +LWGSI EP M K  GDDEYLWS+TKGF+++PSPAQ
Sbjct:    1 MSDKEVWEPLAMVDYIMLGFVGTVQTFALGVCIHLLSWRHWPPYVTKNVDIVIVMVGGQRSVDILGKAVTVLKGRTADSHSFGRQTAHKVEKVNICPKKGRSRFVCHKQRSYIPFRLLLGPFAPFPLPSSNPPRLPPPLALFVLLPSSIPLAAFLQTFAGFAWTIAGALENGLIRRSEGDLLAKCYLERFLAWSALCTHIFAFFIRVYRMWRILVKHDDSMWPAKFLSVTFALDKVDLSRSTSPVLTTPVRYQIMLLSSISLVPPLVALLVPGAYVFDETVNSCNTTSTSRNVVLAMNVVGFYTMCYLWFVCTRQLRWVRKQFNEYETMKWTLSCLTLLLFSYVVVVVVVLDNQHVYVRRVAIVYPALTTHAVLWGSIGEPVMKKWTGDDEYLWSFTKGFSEMPSPAQ 408          
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: D7FTZ7_ECTSI (Similar to regulator of G-protein signaling 16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ7_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 3.530e-94
Identity = 151/283 (53.36%), Postives = 182/283 (64.31%), Query Frame = 0
Query:    2 VAEDEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLWWRKWPPYVTKNVDVVIISTFSGVLWNVAMIIASGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIFYPLLTTYILLWGSIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQVR 284
            ++++E WEPL+  D+ +LG V  FQA AL VC HL+ WRKWPPYVTKNVD+VII T +G  W  A  + +G I R  GD LA C FE   SWSTL  H +SF +RVYRMWRILIKHDD MW                               A N          VVL M+ALGF AICYLWFVCARQL+WVRKQFNEYEAMK TL  +T+ L SY  +V  +L +  V  RRV+I YP+LTTY LLWGSI EP   K+ GD EYL+S+TKGF+++PSPAQ++
Sbjct:    1 MSDEEPWEPLTFVDYVMLGMVGAFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTLAGFAWTFASALETGIIERSEGDFLANCYFEVIFSWSTLLAHMMSFAVRVYRMWRILIKHDDHMW------------------------------PAKN----------VVLAMNALGFYAICYLWFVCARQLRWVRKQFNEYEAMKWTLSCLTLLLFSYAAVVAIVLNNQHVYVRRVAIVYPVLTTYTLLWGSIGEPIKRKLAGDTEYLYSFTKGFSEMPSPAQLK 243          
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: A0A6H5KB09_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB09_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 6.710e-92
Identity = 146/231 (63.20%), Postives = 171/231 (74.03%), Query Frame = 0
Query:   88 ERFLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHT----------------------------------GHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIFYPLLTTYILLWGSIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQVR 284
            + FL+WSTLCVHTV+FF RVYRMWRIL KHDD+MWHT                                    QIL MSSLSLIPVVA WA+P+TG FDE  N C T + S VV+LGM+ LGFL I YLWFVCARQLKWVRKQFNEY++MKRTLLYMTITLASYGV+V++LLAD++ + RR ++ YP++TTYILLW SIREPFM KI+G+DEYL SYT GFAQLPSPAQ++
Sbjct:    4 QSFLAWSTLCVHTVAFFFRVYRMWRILTKHDDQMWHTVREYQLSERFGRLDARRMRHLLCASYISFSMQRHSDQILSMSSLSLIPVVAAWAIPNTGDFDEVENACFTLSVSTVVILGMNGLGFLMIFYLWFVCARQLKWVRKQFNEYDSMKRTLLYMTITLASYGVVVLFLLADNVTVSRRAALGYPVMTTYILLWVSIREPFMKKILGNDEYLGSYTHGFAQLPSPAQLK 234          
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 1.440e-70
Identity = 132/281 (46.98%), Postives = 169/281 (60.14%), Query Frame = 0
Query:    4 EDEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLWWRKWPPYVTKNVDVVIISTFSGVLWNVAMIIASGYIRREAGDILAACDFERFLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIFYPLLTTYILLWGSIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQVR 284
            + E WEPL+  D+ +LG V TFQA AL VC HL+ WRKWPPYVTKNVD+VII TF+G  W  A  +  G I+R   D LA C FE     ST  V       R++R+                Q+L +SS  LIP++     P   +FDE AN+C T+T +  VVLGMDA GF  I  LW VCARQL+WVRKQFNEYEAMK TL  +TI L SY ++V  +L       RRV+I +              EPF MK+ G+ EYL+S+T+GF+++PSPAQ++
Sbjct:    3 DKEPWEPLAFVDYLMLGIVCTFQAFALGVCIHLIRWRKWPPYVTKNVDIVIIMTFAGFAWTFAAAVGHGLIQRSEDDFLANCYFE-----STDAVPACP--TRLFRV----------------QVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAIILDGHHCYVRRVAIAW--------------EPFKMKLTGNAEYLYSFTQGFSEMPSPAQLK 246          
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Match: D7FIR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR9_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 8.950e-67
Identity = 116/195 (59.49%), Postives = 131/195 (67.18%), Query Frame = 0
Query:   90 FLSWSTLCVHTVSFFIRVYRMWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGYFDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEYEAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIFYPLLTTYILLWGSIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQVR 284
            FL+WSTLCVHT +FF RVYRMWRILIKHDDKMW+TG                                                          FVCARQLKWVRKQFNEYE+MKRTLLYMTITLASYGV+V++LLADDL + RRV++FYP++TTYILLWGSIREPFMMKI+GDDEYL SYT GFAQLPSPAQ++
Sbjct:    3 FLTWSTLCVHTAAFFFRVYRMWRILIKHDDKMWNTG----------------------------------------------------------FVCARQLKWVRKQFNEYESMKRTLLYMTITLASYGVVVLFLLADDLTVSRRVALFYPVMTTYILLWGSIREPFMMKILGDDEYLGSYTHGFAQLPSPAQLK 139          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9380.30867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KAT5_9PHAE6.290e-17187.06RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FIR8_ECTSI8.240e-16896.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTZ6_ECTSI4.700e-11160.30Similar to regulator of G-protein signaling 16 n=1... [more]
A0A6H5JJQ0_9PHAE2.220e-10851.77RGS domain-containing protein n=3 Tax=Ectocarpus T... [more]
D7FTZ9_ECTSI5.770e-10553.52RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K025_9PHAE1.360e-9540.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTZ7_ECTSI3.530e-9453.36Similar to regulator of G-protein signaling 16 n=1... [more]
A0A6H5KB09_9PHAE6.710e-9263.20RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTZ5_ECTSI1.440e-7046.98Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]
D7FIR9_ECTSI8.950e-6759.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 226..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..225
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..186
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 187..206
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 231..250
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 251..284
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..49
NoneNo IPR availableTMHMMTMhelixcoord: 89..108
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 128..150
NoneNo IPR availableTMHMMTMhelixcoord: 17..39
NoneNo IPR availableTMHMMTMhelixcoord: 207..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9380contigEcto-sp8_S_contig9380:3618..7252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9380.30867.1mRNA_Ecto-sp8_S_contig9380.30867.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9380 3618..7252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9380.30867.1 ID=prot_Ecto-sp8_S_contig9380.30867.1|Name=mRNA_Ecto-sp8_S_contig9380.30867.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=284bp
MVAEDEVWEPLSTPDFWVLGFVATFQAVALLVCAHLLWWRKWPPYVTKNV
DVVIISTFSGVLWNVAMIIASGYIRREAGDILAACDFERFLSWSTLCVHT
VSFFIRVYRMWRILIKHDDKMWHTGHQILFMSSLSLIPVVATWAVPHTGY
FDEAANTCSTTTFSAVVVLGMDALGFLAICYLWFVCARQLKWVRKQFNEY
EAMKRTLLYMTITLASYGVIVVYLLADDLVLGRRVSIFYPLLTTYILLWG
SIREPFMMKIVGDDEYLWSYTKGFAQLPSPAQVR
back to top