prot_Ecto-sp8_S_contig9367.30848.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9367.30848.1
Unique Nameprot_Ecto-sp8_S_contig9367.30848.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9367.30848.1 vs. uniprot
Match: D7FPT3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT3_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 9.960e-45
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 
Query:    1 MNFSASSTSEDERGGTASRGGSRIVSGLGEGVAGNISRTSIVGGDKPGAVSLATLDVGARVSPALPYGKVVSLPSGGSGIGLIRGR 86
            MNFSASSTSEDERGGTASRGGSRIVSGLGEGVAGNISRTSIVGGDKPGAVSLATLDVGARVSPALPYGKVVSLPSGGSGIGLIRGR
Sbjct:  378 MNFSASSTSEDERGGTASRGGSRIVSGLGEGVAGNISRTSIVGGDKPGAVSLATLDVGARVSPALPYGKVVSLPSGGSGIGLIRGR 463
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BLAST of mRNA_Ecto-sp8_S_contig9367.30848.1 vs. uniprot
Match: A0A6H5KZN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN9_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.180e-43
Identity = 77/86 (89.53%), Postives = 82/86 (95.35%), Query Frame = 0 
Query:    1 MNFSASSTSEDERGGTASRGGSRIVSGLGEGVAGNISRTSIVGGDKPGAVSLATLDVGARVSPALPYGKVVSLPSGGSGIGLIRGR 86
            MNFS+S+TSEDERGGTASRGGSRI +GLGEGVAGNISRTSIVGGDKPGAVSLAT+DVGARV PALPY K+VSLPSG SGIGLIRGR
Sbjct:    1 MNFSSSTTSEDERGGTASRGGSRIAAGLGEGVAGNISRTSIVGGDKPGAVSLATIDVGARVPPALPYDKIVSLPSGDSGIGLIRGR 86
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9367.30848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPT3_ECTSI9.960e-45100.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KZN9_9PHAE1.180e-4389.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9367contigEcto-sp8_S_contig9367:1825..2085 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9367.30848.1mRNA_Ecto-sp8_S_contig9367.30848.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9367 187..2548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9367.30848.1 ID=prot_Ecto-sp8_S_contig9367.30848.1|Name=mRNA_Ecto-sp8_S_contig9367.30848.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=87bp
MNFSASSTSEDERGGTASRGGSRIVSGLGEGVAGNISRTSIVGGDKPGAV
SLATLDVGARVSPALPYGKVVSLPSGGSGIGLIRGR*
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