prot_Ecto-sp8_S_contig93629.30840.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig93629.30840.1
Unique Nameprot_Ecto-sp8_S_contig93629.30840.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length115
Homology
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BLAST of mRNA_Ecto-sp8_S_contig93629.30840.1 vs. uniprot
Match: Q8QNE3_ESV1K (EsV-1-136 n=2 Tax=root TaxID=1 RepID=Q8QNE3_ESV1K)

HSP 1 Score: 213 bits (543), Expect = 7.190e-70
Identity = 108/115 (93.91%), Postives = 110/115 (95.65%), Query Frame = 0 
Query:    1 MSNPAFPDSTSGTPALPMVPDLGVDTPMVRVPNTVSNEQYQEIPAWTYRKFRLTDLFYSKVGISATTALCTFSVLSVLNPPFVQEKSDNPIEISKPSFTILYCISLFVFLFMMIV 115
            MS PAFPDSTSGT  LPMVPDLGVDTP+VRVPNT SNEQYQEIPAWTYRKF+LTDLFYSKVGISATTALCTFSVLSVLNPPFVQEKSDNPIEISKPSFTILYCISLF FLFMMIV
Sbjct:    1 MSTPAFPDSTSGTAPLPMVPDLGVDTPIVRVPNTFSNEQYQEIPAWTYRKFQLTDLFYSKVGISATTALCTFSVLSVLNPPFVQEKSDNPIEISKPSFTILYCISLFAFLFMMIV 115
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig93629.30840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNE3_ESV1K7.190e-7093.91EsV-1-136 n=2 Tax=root TaxID=1 RepID=Q8QNE3_ESV1K[more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..115
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 98..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig93629contigEcto-sp8_S_contig93629:3..347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig93629.30840.1mRNA_Ecto-sp8_S_contig93629.30840.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig93629 3..347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig93629.30840.1 ID=prot_Ecto-sp8_S_contig93629.30840.1|Name=mRNA_Ecto-sp8_S_contig93629.30840.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=115bp
MSNPAFPDSTSGTPALPMVPDLGVDTPMVRVPNTVSNEQYQEIPAWTYRK
FRLTDLFYSKVGISATTALCTFSVLSVLNPPFVQEKSDNPIEISKPSFTI
LYCISLFVFLFMMIV
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