prot_Ecto-sp8_S_contig936.30832.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig936.30832.1
Unique Name	prot_Ecto-sp8_S_contig936.30832.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	679

Homology

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BLAST of mRNA_Ecto-sp8_S_contig936.30832.1 vs. uniprot
Match: A0A6H5KH27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH27_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 7.490e-137
Identity = 462/638 (72.41%), Postives = 470/638 (73.67%), Query Frame = 0

Query:   57 PTSSKRDGSATLXXXXXXXXXXXXXXXXXXXXXXXXXRVGAAISVGHPSVVVASSWTKRAEQFEENRARDGRYSAPAPPVEAATTRGDVASRSVATATASFSGPGAPASMNRRPRRPWEWTPQDCKAVAQRAMAGAGGAGAGDVGGVRVLMAADPVILFDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------ELSAALNRNPPRRRLAVAKQEPGAVLPGNPGSDASARWGGGGPAAGG------DVAGLPASHQAGRGNGSSRPWPAPTPGRVSSSGKQGPGVSADGKVAQLQQQWQQPAASGRCGAADGGNRSMLGKKSSTGRSATPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--AGGHPWVANGLFFGLGTTAEVLWDDGRWYRCCVSTVSGDGHSGVLEFFPYKRATRVREYSTQLDFGEWIRDGRIALPETNLKWD 678
            PT SK+ GSATL      XXXXXXXXXXXXXXXXXXX  GAA+SVGHPSVVVASSWTKRAEQFEENRARD RYSAPAPPVEA TTR DVASRSVATATASF+GP APASMNRRPRRPWEWTPQDCKAVAQRAMAGA GAG GDVGGVRVLMAADPV+LFDSD  XXXXXXXXXXXXXX                                               XXXXXXXXXXXXXX                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        ELS ALNRN PRRRLAVAKQEPGAVLPGNPGSDA ARWGGGGPAAGG      D AGLPASHQA RGNGSSRPWPAPTPGRVS++GKQGPGVSADG VAQLQQ                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     A  AGGHPWV +GLFFGLGTTAEVLWDDGRWYRCCVST+SGDG SGVLEFFPYKRATRVREYSTQLDF EWIRDGRIALPETNLKWD
Sbjct:    2 PTISKKGGSATLARSSKAXXXXXXXXXXXXXXXXXXXXAGAAVSVGHPSVVVASSWTKRAEQFEENRARDLRYSAPAPPVEA-TTRDDVASRSVATATASFAGPAAPASMNRRPRRPWEWTPQDCKAVAQRAMAGAAGAGGGDVGGVRVLMAADPVVLFDSDDDXXXXXXXXXXXXXXGDQATSWTSDSSSSGDAWPSHGRATTTEASAVSLDGGRGGGTWTGTGXXXXXXXXXXXXXXGTLSTIPGKKRRGSRQDLGSGKTTADDGDGTNTATVIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKARELSVALNRNTPRRRLAVAKQEPGAVLPGNPGSDAFARWGGGGPAAGGEHGRGGDAAGLPASHQASRGNGSSRPWPAPTPGRVSTNGKQGPGVSADG-VAQLQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGTAAVAAGGHPWVESGLFFGLGTTAEVLWDDGRWYRCCVSTISGDGQSGVLEFFPYKRATRVREYSTQLDFEEWIRDGRIALPETNLKWD 637

[Close]

BLAST of mRNA_Ecto-sp8_S_contig936.30832.1 vs. uniprot
Match: D8LH41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH41_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 4.190e-75
Identity = 191/243 (78.60%), Postives = 193/243 (79.42%), Query Frame = 0

Query:  420 ELSAALNRNPPRRRLAVAKQEPGAVLPGNPGSDASARWGGGGPAAGG------DVAGLPASHQAGRGNGSSRPWPAPTPGRVSSSGKQGPGVSADGKVAQLQQQWQQPAASGRCGAADGGNRSMLGKKSSTGRSATPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGHPWVANGLFFGLGTTAEVLWDDGRWYRCCVSTVSGDGHSGVLEFFPYKRATRVREYSTQ 656
            ELSAALNRNPPRRRLAV+KQEPGAVL GNPGSDASARWG GGPA         D AGLPASHQAGR NGSSRPWPAPT GRVSSSGKQGPGVSADGKVAQLQ Q                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGHPWVA+GLFFGLGTTAEVLWDDGRWYRCCVSTVSGDG SGVLEFFPYKRATRVREYSTQ
Sbjct:   34 ELSAALNRNPPRRRLAVSKQEPGAVLLGNPGSDASARWGDGGPAXXXXXXXXXDAAGLPASHQAGRRNGSSRPWPAPTAGRVSSSGKQGPGVSADGKVAQLQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGHPWVASGLFFGLGTTAEVLWDDGRWYRCCVSTVSGDGQSGVLEFFPYKRATRVREYSTQ 276

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig936.30832.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig936.30832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KH27_9PHAE	7.490e-137	72.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LH41_ECTSI	4.190e-75	78.60	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..10
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 11..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..678
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 23..27
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig936	contig	Ecto-sp8_S_contig936:5130..7968 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig936.30832.1	mRNA_Ecto-sp8_S_contig936.30832.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig936 3902..10554 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig936.30832.1 ID=prot_Ecto-sp8_S_contig936.30832.1|Name=mRNA_Ecto-sp8_S_contig936.30832.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=679bp
MEKNTPTSKGGAAAAAAAAAAAAAAAAAPSPPGGKQASKIVGTKPTNASS
TKSTERPTSSKRDGSATLARSSNATTGTRTTAVATTKKKKKKRRVGAAIS
VGHPSVVVASSWTKRAEQFEENRARDGRYSAPAPPVEAATTRGDVASRSV
ATATASFSGPGAPASMNRRPRRPWEWTPQDCKAVAQRAMAGAGGAGAGDV
GGVRVLMAADPVILFDSDDDDEGCEDDAQEKGDRTTSWTSDSSSGGGAWP
SHGRATTTGASAVALDGGSGGGTWTGAGGPPTPPAAAAAGTLSTIPEKKS
GGSRQALRSGKAAEDDGDGSNTATVIPDDDSKSSQEDDEAEAPNCLTSPT
GSKRQQQQQQQQRGKRAGSGRRAAGGVTWTSVSSKRGGGGSSSSSHRRRS
VTAASVAVTSVDDDERKARELSAALNRNPPRRRLAVAKQEPGAVLPGNPG
SDASARWGGGGPAAGGDVAGLPASHQAGRGNGSSRPWPAPTPGRVSSSGK
QGPGVSADGKVAQLQQQWQQPAASGRCGAADGGNRSMLGKKSSTGRSATP
ASAKKQKKTTAASGGSCSPASSTGETPAAATTTGGKKRGTAAVAAGGHPW
VANGLFFGLGTTAEVLWDDGRWYRCCVSTVSGDGHSGVLEFFPYKRATRV
REYSTQLDFGEWIRDGRIALPETNLKWD*