prot_Ecto-sp8_S_contig9359.30830.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9359.30830.1
Unique Nameprot_Ecto-sp8_S_contig9359.30830.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length328
Homology
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: A0A6H5KZG9_9PHAE (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG9_9PHAE)

HSP 1 Score: 457 bits (1177), Expect = 1.320e-158
Identity = 297/329 (90.27%), Postives = 302/329 (91.79%), Query Frame = 0
Query:    1 MKRDRDGSQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRPEXXXXXXXXXXXXXSSASRNGHVAAVSNGSSNHPPAAFAPATAAVGTASRINDAGDGGGANVFTASXXXXXXXXXXXXXATSCAMKRPKLGYEHPDNWRATADEVLVKAGLESGGKEGRSRAGDEEGSSTRRGNDKEKQQQPGATKAVAAARSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQDIEGPDMADFDVVLCFETRVFYLVVEGTCS--PET 327
            MKRDRDGSQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRP+ XXXXXXXXXXXXSSASRNG VAAVSNGSSNHPPAAFAPATAAVGTASR+N AGDGGGANVFTAS              TS AMKRPKLGYEHPDNWRATADEVLVKAGLE G KEG+SRAGDEEGSSTRRGNDKEKQQQPGATK +AAARSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQ+IEGPDMADFDVVLCFETRVFYLVVE   S  PET
Sbjct:    1 MKRDRDGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNRPQQXXXXXXXXXXXXSSASRNGQVAAVSNGSSNHPPAAFAPATAAVGTASRMNGAGDGGGANVFTASSYSERAPSSSSTP-TSSAMKRPKLGYEHPDNWRATADEVLVKAGLEGGDKEGKSRAGDEEGSSTRRGNDKEKQQQPGATKTMAAARSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEDLQSRDPET 328          
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: D8LSD4_ECTSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD4_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 6.880e-120
Identity = 189/231 (81.82%), Postives = 191/231 (82.68%), Query Frame = 0
Query:   97 INDAGDGGGANVFTASXXXXXXXXXXXXXATSCAMKRPKLGYEHPDNWRATADEVLVKAGLESGGKEGRSRAGDEEGSSTRRGNDKEKQQQPGATKAVAAARSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQDIEGPDMADFDVVLCFETRVFYLVVEGTCSPET 327
            +NDAGD GGANVFTAS             ATS AMKRPKLGYEHPDNWRATADEVLVKAGLE  GKE RSRAGDEEGS                      ARSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQ+IEGPDMADFDVVLCFETRVFYLVVEGTCSPET
Sbjct:    1 MNDAGDRGGANVFTASSSSARAPSSSST-ATSSAMKRPKLGYEHPDNWRATADEVLVKAGLERVGKEERSRAGDEEGSXXXXXXXXXXXXXXXXXXXXXXARSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEGTCSPET 230          
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: D8LTB5_ECTSI (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB5_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 3.670e-43
Identity = 89/180 (49.44%), Postives = 117/180 (65.00%), Query Frame = 0
Query:  142 DNWRATADEVLVKAGLESGGKEGRSRAGDEEGSSTRRGNDKEKQQQPGATKAVAAARSKRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQDIEGPDMADFDVVLCFETRVFYLVVEG 321
            + WRA A+ +L  AG++  G   RS  G+  GS                        S++ FAVVCS+N NRS+MA  LLKEH+ + +SYGTGREVRLPGKD  SP+ FPFGTPY +I D L  ++EALF +N++L L+ RNA  K AP+R+Q ++G  +A FDVV+CFE+RVF LVVEG
Sbjct:  108 EGWRAAANAIL-SAGVKEDGAGSRSSKGESSGS------------------------SRKSFAVVCSSNVNRSIMAEILLKEHDIRAQSYGTGREVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGEHVASFDVVVCFESRVFDLVVEG 262          
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: A0A836ASG4_9ROSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836ASG4_9ROSI)

HSP 1 Score: 134 bits (337), Expect = 3.600e-35
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 0
Query:  202 RFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQDIEGPDMADFDVVLCFETRVFYLVVEG 321
            R+A+VCS+N NRSM AH LLK H F V SYGTG  V+LPG  +  P V+ FGTPY+ +FD L+ KD  L+ +N +LP++ RN+ VK APQR+QD        F VVL FE +VF +V+EG
Sbjct:    4 RYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGSHVKLPGPSLREPNVYDFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNAAD--GSFTVVLTFEEKVFDMVLEG 121          
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: A0A7S0QYP3_9CHLO (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QYP3_9CHLO)

HSP 1 Score: 135 bits (340), Expect = 4.960e-35
Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = 0
Query:  200 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQDIEGPDMADFDVVLCFETRVFYLVVE 320
            K+RFA+VC++N NRSM AH +LK +NFQV SYG G  V+LPG +  SP  +PFGTPY+ I+D LK KDE L+ +N LLP++ RN  VK AP+R+QD    +   FDVVL FE  VF  VVE
Sbjct:    5 KKRFAMVCASNQNRSMEAHCMLKNNNFQVSSYGVGAHVKLPGPNQKSPNTYPFGTPYQYIYDDLKKKDEELYIRNGLLPMLERNITVKTAPERWQD----NRDQFDVVLTFEESVFEKVVE 121          
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: UPI0010A4EFFF (RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4EFFF)

HSP 1 Score: 132 bits (332), Expect = 9.070e-35
Identity = 64/123 (52.03%), Postives = 85/123 (69.11%), Query Frame = 0
Query:  202 RFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQD--IEGPDMADFDVVLCFETRVFYLVVEGT 322
            R+AVVCS+N NRSM AH LLK   F V SYGTG  V+LPG+ +  P V+ FGTPY+ + D L+ KD+ L+ +N +LP++ RN+ VK APQR+QD   EG     FD+V  FE +VF +V EG+
Sbjct:    4 RYAVVCSSNQNRSMEAHSLLKRQGFDVCSYGTGAHVKLPGRSLREPNVYDFGTPYKQMLDDLRRKDQELYKRNGILPMLKRNSTVKLAPQRWQDNAAEG----SFDIVFTFEEKVFDMVAEGS 122          
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: A0A067E3T4_CITSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067E3T4_CITSI)

HSP 1 Score: 134 bits (337), Expect = 1.230e-34
Identity = 67/129 (51.94%), Postives = 87/129 (67.44%), Query Frame = 0
Query:  200 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQD--IEGPDMADFDVVLCFETRVFYLVVEGTCSPE 326
            K R+A+VCS+N NRSM AH LLK H F V SYGTG  V+LPG  +  P V+ FGTPY+ +FD L+ KD  L+ +N +LP++ RN  VKAAPQR+QD  ++G     FD+V  FE +VF  VVE   + E
Sbjct:    2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDG----SFDIVFTFEEKVFDTVVEDLNTRE 126          
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: A0A067DWF9_CITSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=5 Tax=Citrus TaxID=2706 RepID=A0A067DWF9_CITSI)

HSP 1 Score: 134 bits (337), Expect = 1.340e-34
Identity = 67/129 (51.94%), Postives = 87/129 (67.44%), Query Frame = 0
Query:  200 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQD--IEGPDMADFDVVLCFETRVFYLVVEGTCSPE 326
            K R+A+VCS+N NRSM AH LLK H F V SYGTG  V+LPG  +  P V+ FGTPY+ +FD L+ KD  L+ +N +LP++ RN  VKAAPQR+QD  ++G     FD+V  FE +VF  VVE   + E
Sbjct:    2 KYRYAMVCSSNQNRSMEAHYLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKQMFDDLRRKDPELYKRNGILPMLKRNIGVKAAPQRWQDNALDG----SFDIVFTFEEKVFDTVVEDLNTRE 126          
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: UPI00053FFF3D (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FFF3D)

HSP 1 Score: 133 bits (335), Expect = 2.640e-34
Identity = 64/127 (50.39%), Postives = 89/127 (70.08%), Query Frame = 0
Query:  200 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQDIEGPDMADFDVVLCFETRVFYLVVEGTCSPE 326
            K R+A+VCS+N NRSM AH ++K+  F V SYGTG  V+LPG  I+ P V+ FGTPY+ +FD+L+ KD  L+ +N +LP++ RN+ VK APQR+QD     +  FDVV+ FE +VF +VVE   + E
Sbjct:    2 KLRYAMVCSSNQNRSMEAHFIMKKQGFDVSSYGTGAHVKLPGPSISKPNVYEFGTPYKQMFDELRRKDPELYKRNGILPMLKRNSSVKLAPQRWQDNAHDGV--FDVVITFEEKVFDMVVEDLYNRE 126          
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Match: A0A218Y2F5_PUNGR (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218Y2F5_PUNGR)

HSP 1 Score: 133 bits (335), Expect = 2.720e-34
Identity = 64/127 (50.39%), Postives = 85/127 (66.93%), Query Frame = 0
Query:  200 KRRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQDIEGPDMADFDVVLCFETRVFYLVVEGTCSPE 326
            K R+A+VCS+N NRSM AH LLK   F V SYGTG  V+LPG  +  P V+ FGTPY+ +FD+L+ KD  L+ +N +LP++ RN  +K APQR+Q  E      FDVVL FE +VF +V+E   S +
Sbjct:    2 KLRYAMVCSSNQNRSMEAHSLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQMFDELRRKDPELYKRNGILPMLKRNMSIKTAPQRWQ--ENASDGSFDVVLTFEEKVFDMVLEDLNSRD 126          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9359.30830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZG9_9PHAE1.320e-15890.27Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
D8LSD4_ECTSI6.880e-12081.82RNA polymerase II subunit A C-terminal domain phos... [more]
D8LTB5_ECTSI3.670e-4349.44Protein-serine/threonine phosphatase n=1 Tax=Ectoc... [more]
A0A836ASG4_9ROSI3.600e-3553.33RNA polymerase II subunit A C-terminal domain phos... [more]
A0A7S0QYP3_9CHLO4.960e-3556.20RNA polymerase II subunit A C-terminal domain phos... [more]
UPI0010A4EFFF9.070e-3552.03RNA polymerase II subunit A C-terminal domain phos... [more]
A0A067E3T4_CITSI1.230e-3451.94RNA polymerase II subunit A C-terminal domain phos... [more]
A0A067DWF9_CITSI1.340e-3451.94RNA polymerase II subunit A C-terminal domain phos... [more]
UPI00053FFF3D2.640e-3450.39RNA polymerase II subunit A C-terminal domain phos... [more]
A0A218Y2F5_PUNGR2.720e-3450.39RNA polymerase II subunit A C-terminal domain phos... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 201..281
e-value: 8.2E-13
score: 50.5
NoneNo IPR availablePANTHERPTHR20383:SF9RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASE SSU72coord: 200..320
IPR006811RNA polymerase II subunit APFAMPF04722Ssu72coord: 202..321
e-value: 5.1E-43
score: 146.9
IPR006811RNA polymerase II subunit APANTHERPTHR20383FAMILY NOT NAMEDcoord: 200..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9359contigEcto-sp8_S_contig9359:3439..4942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9359.30830.1mRNA_Ecto-sp8_S_contig9359.30830.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9359 3439..4942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9359.30830.1 ID=prot_Ecto-sp8_S_contig9359.30830.1|Name=mRNA_Ecto-sp8_S_contig9359.30830.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=328bp
MKRDRDGSQHQHHYEYRQQWPQQQYQQHEHQQEEEIPPPPPPRNRPEQEI
PPPPPPRIRPSSASRNGHVAAVSNGSSNHPPAAFAPATAAVGTASRINDA
GDGGGANVFTASSSSARAPSSSSSTATSCAMKRPKLGYEHPDNWRATADE
VLVKAGLESGGKEGRSRAGDEEGSSTRRGNDKEKQQQPGATKAVAAARSK
RRFAVVCSANFNRSMMAHKLLKEHNFQVESYGTGREVRLPGKDIASPEVF
PFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQDIEGPD
MADFDVVLCFETRVFYLVVEGTCSPET*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006811RNA_pol_II_suA