prot_Ecto-sp8_S_contig9352.30821.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9352.30821.1
Unique Nameprot_Ecto-sp8_S_contig9352.30821.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length200
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9352.30821.1 vs. uniprot
Match: A0A6H5JRR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR9_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.740e-22
Identity = 78/95 (82.11%), Postives = 79/95 (83.16%), Query Frame = 0 
Query:   83 NSSEAGLLGESARSRERYHEEHREAMESVSSDALRMRAIKDDLSEVLRRLREGDAQSAEAXXXXXXXXXXXXXASVAQREDKGKEELDAAFQRVS 177
            N SEA LLGESARSRERY EEHREAMESVSSDALRMRAIKDDLSEVLRRLREGDAQSA  XXXXXXXXXXXXX         GKEELDAAF  +S
Sbjct: 1479 NRSEASLLGESARSRERYREEHREAMESVSSDALRMRAIKDDLSEVLRRLREGDAQSAXXXXXXXXXXXXXXXXXXXXXXX-GKEELDAAFHSIS 1572
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BLAST of mRNA_Ecto-sp8_S_contig9352.30821.1 vs. uniprot
Match: D7FUQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ6_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 6.990e-17
Identity = 69/79 (87.34%), Postives = 72/79 (91.14%), Query Frame = 0 
Query:  122 KDDLSEVLRRLREGDAQSAEAXXXXXXXXXXXXXASVAQREDKGKEELDAAFQRVSRRRPRERQQKKSEQRPDLTAAAA 200
            +DDLSEVLRRLREGDAQSAEAXXXXXXXXXXXX ASVAQREDKG+EELDAAFQ     RPRERQQKK EQRPDLTAA+A
Sbjct: 1370 RDDLSEVLRRLREGDAQSAEAXXXXXXXXXXXX-ASVAQREDKGEEELDAAFQI----RPRERQQKKPEQRPDLTAASA 1443
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9352.30821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRR9_9PHAE1.740e-2282.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUQ6_ECTSI6.990e-1787.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9352contigEcto-sp8_S_contig9352:4197..5281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9352.30821.1mRNA_Ecto-sp8_S_contig9352.30821.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9352 4196..5281 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9352.30821.1 ID=prot_Ecto-sp8_S_contig9352.30821.1|Name=mRNA_Ecto-sp8_S_contig9352.30821.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=200bp
PGRRPRGPRRGLSSRRDDDYRDGGGDSYGYVEDKEREEVVAARSGGRREA
ERKEAATRNRTRRRGRVRSESGSSSSSESDHDNSSEAGLLGESARSRERY
HEEHREAMESVSSDALRMRAIKDDLSEVLRRLREGDAQSAEAAAAAAAAG
EQPPPASVAQREDKGKEELDAAFQRVSRRRPRERQQKKSEQRPDLTAAAA
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