prot_Ecto-sp8_S_contig9350.30819.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9350.30819.1
Unique Nameprot_Ecto-sp8_S_contig9350.30819.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length311
Homology
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: D7G3C5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C5_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 6.710e-105
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 0
Query:  146 MKASGQGGGKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGPS 310
            MKASGQGGGKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHG+LAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQ IPLISAAAEIQLGPS
Sbjct:    1 MKASGQGGGKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQ-IPLISAAAEIQLGPS 164          
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: A0A6H5LCJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCJ5_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 5.190e-104
Identity = 239/310 (77.10%), Postives = 240/310 (77.42%), Query Frame = 0
Query:    1 MYVPKIHAATAAAAVLAAREGQARAFHVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSMKASGQGGGKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGPS 310
            MYVPKIHAATAAAAVLAAREGQARAFHVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                         XXXXXXX           LSMKASGQGG KGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHG+LAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQ IPLISAAAEIQLGPS
Sbjct:    1 MYVPKIHAATAAAAVLAAREGQARAFHVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFFCSSSRGNRAGFFPSLLRPTAATLAFCSSSTGWWRSLPRAPSSHRRRQGTAEAVSXXXXXXXAATGTTL----LSMKASGQGGEKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGVLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQ-IPLISAAAEIQLGPS 305          
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: A0A835YUZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ7_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.550e-33
Identity = 68/148 (45.95%), Postives = 95/148 (64.19%), Query Frame = 0
Query:  162 RALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGP 309
            R L    Y+LP+LDG+  GR+V+ AVP +G  V+G+L PALAIW+ VPF+   +F+    + R  + SR +RF++QQAIL+DI  +VLGLL      VAP G        FY L+ AVAY++    +GK  N+ IP+IS AA+ Q+GP
Sbjct:   76 RLLACFPYILPVLDGVGSGRNVYAAVPAVGEAVYGVLGPALAIWNGVPFLGFGVFLAFTFAARNTELSRLVRFSLQQAILIDIALIVLGLLENVTKAVAPGGADVFATLQFYILISAVAYSLVSNLQGKEPNE-IPIISEAAQRQIGP 222          
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: A0A7S0PYH6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PYH6_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 8.960e-24
Identity = 58/149 (38.93%), Postives = 91/149 (61.07%), Query Frame = 0
Query:  161 NRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGP 309
            +R  GT+ Y+LP+LDG   G  V+  VP  G  V G++AP +A++ ++PF  +V+FI L +  R    SR +RFN+QQA+L+DI  ++ GL       +  E +   TNF FY  V  V Y+    A+G++ +Q +P++S AA +Q+GP
Sbjct:   45 DRVFGTLPYILPVLDGFGYGIYVYQNVPGAGE-VAGVIAPLVALFQSLPFAGIVLFIGLSLFTRNAGLSRMVRFNIQQALLLDIALIIPGLFSPVTSLLPLELQIIGTNFVFYVCVFTVIYSAWSNAQGELPDQ-VPVLSEAAMMQIGP 191          
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: A0A7S4ES88_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ES88_CHRCT)

HSP 1 Score: 106 bits (264), Expect = 9.320e-24
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query:  162 RALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGP 309
            R L T+ Y+LP +DG   G  V+  VP +G++  G   P +A ++++PF  LV FI + +  R  + SRF+RFN+QQA+L+DI  +V GL G        E +   TNF FY  V  V YA+   A+GK A  Q+PL+S AA +Q+GP
Sbjct:   75 RVLATLPYVLPAIDGFAYGLYVYQNVPPIGAIA-GAAFPFVASFESIPFGGLVFFIGMSLFTRNPNLSRFVRFNIQQALLLDIALIVPGLFGPLTKTFPVELQILGTNFIFYAWVLVVGYALFSNAQGK-APDQVPLLSDAASMQIGP 220          
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: A0A7S2CM34_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CM34_9EUKA)

HSP 1 Score: 105 bits (261), Expect = 9.700e-24
Identity = 57/149 (38.26%), Postives = 91/149 (61.07%), Query Frame = 0
Query:  161 NRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGP 309
            +RA+   VY+LP+LDG   G +++   P++GS  + LL P +  + NVPF  L++FI L    R++  SR++RFN+QQA+L DI  ++  + G A      E +   +NF +Y +V  V Y+  + A+GK  +  +P+IS AA IQ+GP
Sbjct:   35 DRAVSAAVYILPILDGFVFGSNIYATFPLVGSAAYKLL-PLVNTFQNVPFAGLILFIGLSTFTRKEGLSRYVRFNIQQALLTDIALIIPTVFGGAGRMFPLELQAMGSNFVWYAMVTIVCYSWVQIAQGKSPDG-VPVISEAAAIQIGP 181          
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: A0A5J4YN77_PORPP (Tic20 family protein Ycf60 n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN77_PORPP)

HSP 1 Score: 104 bits (260), Expect = 5.550e-23
Identity = 73/170 (42.94%), Postives = 102/170 (60.00%), Query Frame = 0
Query:  144 LSMKASGQGGGKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFIILQVSV-RRQDTSRFIRFNVQQAILVDILTVVLGL---LGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGP 309
            ++M+  G+GGGK   + +R LGT+ YL+P+LD L  G+ VF  VP   ++V G L P L ++   PF+   +F+ L + V R Q+  RFIRFN QQAIL+DILT++  L   LG+ A  V  EG   V N  FY LV  V YA     +G+  ++ IP ISA+   Q+GP
Sbjct:   77 VTMQMWGRGGGKPGPI-DRVLGTLPYLVPLLDSLVYGKYVFEKVPY-STVVLGPLVPLLEVYRGTPFLAFGIFLALFILVVRNQNVPRFIRFNTQQAILLDILTIIPNLFNGLGSRAPAVIVEG---VNNTVFYGLVACVIYATISNLQGEYPDK-IPGISASVSQQIGP 240          
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: A0A7S0JI91_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JI91_9EUKA)

HSP 1 Score: 101 bits (252), Expect = 3.310e-22
Identity = 59/149 (39.60%), Postives = 86/149 (57.72%), Query Frame = 0
Query:  161 NRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGP 309
            +R  GT+ YLLP LDG   G  ++  VP       G +AP +A++ ++PF  LV+FI L    R    SR +RFN+QQA+L+DI  ++ GL     G +  E +   TN  FY  +  V YA    A+GK+ +Q +PL+S AA +Q+GP
Sbjct:   56 DRLFGTLPYLLPSLDGFGYGAYIYQNVPGAAQAA-GAVAPFVALFQSLPFAGLVLFIGLSFFTRNAGLSRLVRFNIQQALLLDIALIIPGLFSPVTGLLPAELQIIGTNLVFYVCLFTVLYATWCNAQGKLPDQ-VPLLSEAALMQIGP 202          
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: A0A7S2ZG79_9RHOD (Tic20 family protein Ycf60 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZG79_9RHOD)

HSP 1 Score: 98.6 bits (244), Expect = 4.950e-21
Identity = 56/151 (37.09%), Postives = 88/151 (58.28%), Query Frame = 0
Query:  160 RNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFI-ILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGP 309
            ++R    + Y LP+LD L  G  +F   P+   LV   LAP  AI+  +PF+ L +F  +  + VR  + +RFIR+N QQAI++D++ ++  L G AA  +     +   N  FY ++ AV YAV E  RG++ N+ IPL+S + + Q+GP
Sbjct:   55 KDRFFSILPYFLPLLDSLQYGSYLFQKFPVFKELVLYPLAPFYAIYRGIPFLDLAIFFGVFFLVVRNTNINRFIRYNAQQAIMLDLILIIPALFGGAAAQMPRFIAETGANTVFYSILAAVGYAVIENIRGELPNK-IPLVSESVDSQIGP 204          
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Match: A0A7S0I0B2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I0B2_9EUKA)

HSP 1 Score: 99.0 bits (245), Expect = 5.980e-21
Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = 0
Query:  161 NRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAPALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLGLLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLISAAAEIQLGP 309
            +RA    VYL P+ DG+  G+ +F +VP+ G+L   +L  A A +D++PF  L+ FI L    R    SRF+RFN+QQAIL+DI  ++    G     V  E +Q ++N  FY +V A+ Y+    A+GK  +Q +P++S AA   +GP
Sbjct:   81 DRAFAAAVYLFPITDGIFFGKFLFTSVPVFGALCLPILQ-ASAAFDSIPFSGLIFFIGLSSMSRNPGLSRFLRFNLQQAILLDIAFIIPNFFGGVGQMVPIEVQQVLSNTVFYSMVLAIGYSWFSIAQGKTPDQ-VPVVSEAANQAIGP 227          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9350.30819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C5_ECTSI6.710e-10598.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCJ5_9PHAE5.190e-10477.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YUZ7_9STRA1.550e-3345.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0PYH6_9EUKA8.960e-2438.93Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S4ES88_CHRCT9.320e-2441.89Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2CM34_9EUKA9.700e-2438.26Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A5J4YN77_PORPP5.550e-2342.94Tic20 family protein Ycf60 n=2 Tax=Porphyridium pu... [more]
A0A7S0JI91_9EUKA3.310e-2239.60Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S2ZG79_9RHOD4.950e-2137.09Tic20 family protein Ycf60 n=2 Tax=Rhodosorus mari... [more]
A0A7S0I0B2_9EUKA5.980e-2138.93Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005691Chloroplast protein import component Tic20PFAMPF16166TIC20coord: 162..303
e-value: 2.2E-11
score: 43.9
IPR005691Chloroplast protein import component Tic20PANTHERPTHR33510FAMILY NOT NAMEDcoord: 105..307
NoneNo IPR availablePANTHERPTHR33510:SF5PROTEIN TIC 20-II, CHLOROPLASTICcoord: 105..307
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..260
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 266..284
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..239
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 261..265
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 285..310
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..219
NoneNo IPR availableTMHMMTMhelixcoord: 239..261
NoneNo IPR availableTMHMMTMhelixcoord: 197..219
NoneNo IPR availableTMHMMTMhelixcoord: 266..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9350contigEcto-sp8_S_contig9350:2723..6645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9350.30819.1mRNA_Ecto-sp8_S_contig9350.30819.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9350 2415..6645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9350.30819.1 ID=prot_Ecto-sp8_S_contig9350.30819.1|Name=mRNA_Ecto-sp8_S_contig9350.30819.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=311bp
MYVPKIHAATAAAAVLAAREGQARAFHVNNNDNNASSSSRLLLRGVPRAS
AAVHSSSSSDRMTVATAAAALPYCCSSSRGHRAGFFSSLLRPTAATLAFC
SSSSTGWWRSLPRASSSHRRGQGAAEAVSRRRRGASAATTTTLLSMKASG
QGGGKGESVRNRALGTVVYLLPMLDGLDCGRDVFHAVPMLGSLVHGLLAP
ALAIWDNVPFMPLVMFIILQVSVRRQDTSRFIRFNVQQAILVDILTVVLG
LLGTAAGYVAPEGEQFVTNFAFYCLVGAVAYAVAETARGKMANQQIPLIS
AAAEIQLGPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005691Tic20