prot_Ecto-sp8_S_contig9342.30805.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig9342.30805.1
Unique Name	prot_Ecto-sp8_S_contig9342.30805.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	711

Homology

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BLAST of mRNA_Ecto-sp8_S_contig9342.30805.1 vs. uniprot
Match: D8LKT0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT0_ECTSI)

HSP 1 Score: 1015 bits (2625), Expect = 0.000e+0
Identity = 675/713 (94.67%), Postives = 679/713 (95.23%), Query Frame = 0

Query:    1 MAGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXXXXXXATAVCPRPSYRSYLAALTACXXXXXXXXXXXXXXSGDGVRGDWRAAKEVLRMMWEDEAARAAKGDVAVPGTWSTELQEALSLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALVLLSEMEDRGLNPNEAALRALIRGFALEGVVADGGEGGPAADRERAERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDKKRFVLEERTFAEAVRDILRRAEERRKRVERVEEDGGAFPANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAELLXXXXXXXXXXXXXXXXXXXXXXXXX--AKTVAIPKSIDKPKGGFDAAAESVGGDGARRRGRVGALSAHRXXXXXXXXXXXXXXXXXXXXSRLEPRRKPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPLVRRKENGGGDGK 711
            M GVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXX      TAVCPRPSYRSYLAAL   XXXXXXXXXXXXXXSGDGVRGDWRAAKEVLRMMWEDEAARAAKGDVAVPGTWSTELQEALSLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEAL LLSEME RGL+PNEAALRALIRGFALEGVVADGG GGPAADRERAERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            TFAEAVRDILRRAEERRKRVERVEEDGGAFPANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAE L  XXXXXXXXXXXXXXXXXXXXXXX  AKTVAIPKSIDKPKGGFDAAAES GGDGARRRGRVGALSAH XXXXXXXXXXXXXXXXXX  SRLEPRRKPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQP+V+RKENGGG+GK
Sbjct:  424 MLGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXX-----TTAVCPRPSYRSYLAALXXXXXXXXXXXXXXXXXSGDGVRGDWRAAKEVLRMMWEDEAARAAKGDVAVPGTWSTELQEALSLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALGLLSEMEGRGLSPNEAALRALIRGFALEGVVADGGGGGPAADRERAERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TFAEAVRDILRRAEERRKRVERVEEDGGAFPANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAERLAAXXXXXXXXXXXXXXXXXXXXXXXXXAKTVAIPKSIDKPKGGFDAAAESAGGDGARRRGRVGALSAHXXXXXXXXXXXXXXXXXXXG-SRLEPRRKPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPMVKRKENGGGNGK 1128

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BLAST of mRNA_Ecto-sp8_S_contig9342.30805.1 vs. uniprot
Match: A0A6H5L195_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L195_9PHAE)

HSP 1 Score: 935 bits (2416), Expect = 0.000e+0
Identity = 627/738 (84.96%), Postives = 634/738 (85.91%), Query Frame = 0

Query:    1 MAGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXXXXXXATAVCPRPSYRSYLAALTACXXXXXXXXXXXXXX---SGDGVRGDWRAAKEVLRMMWEDEAARAAK--------------------------GDVAVPGTWSTELQEALSLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALVLLSEMEDRGLNPNEAALRALIRGFALEGVVADGGEGGPAADRERAERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GNDKKRFVLEERTFAEAVRDILRRAEERRKRVERVEEDGGAFPANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAELLXXXXXXXXXXXXXXXXXXXXXXXXXAKTVAIPKSIDKPKGGFDAAAESVGGDGARRRGRVGALSAHRXXXXXXXXXXXXXXXXXXXXSRLEPRRKPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPLVRRKENGGG 708
            M GVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXXXX  ATAVCPRPSYRSYLAA    XXXXXXXXXXXXXX   SGDGVRGDWRAAKEVLRMMWEDEAAR                             G +A  GTWSTELQEAL LGPSHVTMPAVPDAACYQLAMECCVSGGRNDEAL LLSEME RGL+PNEAALRALIRGFALEGVVADGG GGPAA+RERAERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLI GSG     XXXXXXXXXXX      XXXXXXXXXX             G+ K R   EE+TFAEA R ILRRAEERR +VERVEEDGGAF ANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAE L  XXXXXXXXXXXXXXXXXXX    AKTVAIP+SIDKPKGGFDAAAES          RVGAL    XXXXXXXXXXXXXXXXXX  SRLEPRRKPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPLVRRK NGGG
Sbjct:  579 MLGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXXXX--ATAVCPRPSYRSYLAAXXXXXXXXXXXXXXXXXXXXXSGDGVRGDWRAAKEVLRMMWEDEAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGLAWCGTWSTELQEALRLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALALLSEMEGRGLSPNEAALRALIRGFALEGVVADGGGGGPAAERERAERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIRGSGGGMVSXXXXXXXXXXXEDSGEVXXXXXXXXXXSASARRVGGNGAAGSIKNR---EEQTFAEAARGILRRAEERRMKVERVEEDGGAFSANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAERLAAXXXXXXXXXXXXXXXXXXXSGS-AKTVAIPRSIDKPKGGFDAAAESXXXXXXXXXXRVGALXXXXXXXXXXXXXXXXXXXXXXG-SRLEPRRKPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPLVRRKGNGGG 1309

[Close]

BLAST of mRNA_Ecto-sp8_S_contig9342.30805.1 vs. uniprot
Match: A0A6H5KDS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS3_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 4.550e-59
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0

Query:  236 RASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTR 334
            RASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTR
Sbjct:    9 RASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTR 107

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig9342.30805.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig9342.30805.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LKT0_ECTSI	0.000e+0	94.67	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5L195_9PHAE	0.000e+0	84.96	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KDS3_9PHAE	4.550e-59	100.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 470..493
None	No IPR available	COILS	Coil	Coil	coord: 522..542
None	No IPR available	PANTHER	PTHR46128	FAMILY NOT NAMED	coord: 54..363
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 203..405 e-value: 9.9E-18 score: 66.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 274..300 e-value: 0.014 score: 15.6 coord: 150..175 e-value: 0.085 score: 13.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 275..300 e-value: 0.0011 score: 17.0 coord: 146..179 e-value: 0.0018 score: 16.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 143..177 score: 10.249
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1..31 score: 5.766
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 235..270 score: 5.481
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 271..301 score: 7.826
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 321..355 score: 7.026

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig9342	contig	Ecto-sp8_S_contig9342:116..7014 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig9342.30805.1	mRNA_Ecto-sp8_S_contig9342.30805.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig9342 116..7014 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig9342.30805.1 ID=prot_Ecto-sp8_S_contig9342.30805.1|Name=mRNA_Ecto-sp8_S_contig9342.30805.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=711bp
MAGVIEACAQRGDAAGALDILQMMRGAAAAAAAAAARSASRKKKKGSAAA
TAVCPRPSYRSYLAALTACSAAAAGDNGGEGGGSGDGVRGDWRAAKEVLR
MMWEDEAARAAKGDVAVPGTWSTELQEALSLGPSHVTMPAVPDAACYQLA
MECCVSGGRNDEALVLLSEMEDRGLNPNEAALRALIRGFALEGVVADGGE
GGPAADRERAERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHP
DGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMRE
GVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRM
NGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTH
ALAAHLIGGSGGGMVSGAGGSSSSGGENGGEVGGGERGGGGGSASAGRLG
GNGAAGNDKKRFVLEERTFAEAVRDILRRAEERRKRVERVEEDGGAFPAN
PRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAELLAAV
AAGGGGGAPPAGRSSSSDDSSSAKTVAIPKSIDKPKGGFDAAAESVGGDG
ARRRGRVGALSAHRRRGGGGGKGDGRAAAVAAAGSRLEPRRKPVLVKTGG
GGSGVQGSLSEEPSPVLEAVVAGLRRKGSNSKGRSRRGSGLSAVPSQPLV
RRKENGGGDGK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat