prot_Ecto-sp8_S_contig92931.30739.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig92931.30739.1
Unique Name	prot_Ecto-sp8_S_contig92931.30739.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	170

Homology

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: A0A0L7LK79_9NEOP (Beta-actin n=1 Tax=Operophtera brumata TaxID=104452 RepID=A0A0L7LK79_9NEOP)

HSP 1 Score: 350 bits (897), Expect = 7.460e-122
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct:    1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: S5M110_BOMMO (Truncated actin-4 n=2 Tax=Endopterygota TaxID=33392 RepID=S5M110_BOMMO)

HSP 1 Score: 350 bits (897), Expect = 8.290e-122
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct:    1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: UPI0019591987 (hypothetical protein n=2 Tax=Escherichia coli TaxID=562 RepID=UPI0019591987)

HSP 1 Score: 350 bits (897), Expect = 1.100e-121
Identity = 168/170 (98.82%), Postives = 170/170 (100.00%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct:   12 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 181

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: S5M0Z1_BOMMO (Truncated actin-4 n=76 Tax=cellular organisms TaxID=131567 RepID=S5M0Z1_BOMMO)

HSP 1 Score: 350 bits (897), Expect = 2.850e-121
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct:    1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: UPI001C099DA2 (hypothetical protein n=1 Tax=Acinetobacter indicus TaxID=756892 RepID=UPI001C099DA2)

HSP 1 Score: 349 bits (895), Expect = 5.550e-121
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKATREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: B3GDA6_CAEBE (Actin (Fragment) n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=B3GDA6_CAEBE)

HSP 1 Score: 348 bits (893), Expect = 1.160e-120
Identity = 167/170 (98.24%), Postives = 169/170 (99.41%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVP YEGY
Sbjct:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPFYEGY 170

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: H8WHC9_CAEBR (Protein CBG29119 n=3 Tax=Chromadorea TaxID=119089 RepID=H8WHC9_CAEBR)

HSP 1 Score: 350 bits (897), Expect = 1.580e-120
Identity = 168/170 (98.82%), Postives = 170/170 (100.00%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGY
Sbjct:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGY 170

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: K4JAS5_9CRUS (Actin (Fragment) n=2 Tax=Arthropoda TaxID=6656 RepID=K4JAS5_9CRUS)

HSP 1 Score: 350 bits (898), Expect = 1.680e-120
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct:    1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: S5M4E9_BOMMO (Truncated actin-4 n=1 Tax=Bombyx mori TaxID=7091 RepID=S5M4E9_BOMMO)

HSP 1 Score: 350 bits (897), Expect = 2.150e-120
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct:    1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170

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BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Match: UPI001F3E6D44 (hypothetical protein n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F3E6D44)

HSP 1 Score: 347 bits (889), Expect = 2.330e-120
Identity = 166/170 (97.65%), Postives = 170/170 (100.00%), Query Frame = 0

Query:    1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170
            MCDD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL+LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY
Sbjct:    1 MCDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILSLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 170

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig92931.30739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0L7LK79_9NEOP	7.460e-122	99.41	Beta-actin n=1 Tax=Operophtera brumata TaxID=10445...	[more]
S5M110_BOMMO	8.290e-122	99.41	Truncated actin-4 n=2 Tax=Endopterygota TaxID=3339...	[more]
UPI0019591987	1.100e-121	98.82	hypothetical protein n=2 Tax=Escherichia coli TaxI...	[more]
S5M0Z1_BOMMO	2.850e-121	99.41	Truncated actin-4 n=76 Tax=cellular organisms TaxI...	[more]
UPI001C099DA2	5.550e-121	99.41	hypothetical protein n=1 Tax=Acinetobacter indicus...	[more]
B3GDA6_CAEBE	1.160e-120	98.24	Actin (Fragment) n=1 Tax=Caenorhabditis brenneri T...	[more]
H8WHC9_CAEBR	1.580e-120	98.82	Protein CBG29119 n=3 Tax=Chromadorea TaxID=119089 ...	[more]
K4JAS5_9CRUS	1.680e-120	99.41	Actin (Fragment) n=2 Tax=Arthropoda TaxID=6656 Rep...	[more]
S5M4E9_BOMMO	2.150e-120	99.41	Truncated actin-4 n=1 Tax=Bombyx mori TaxID=7091 R...	[more]
UPI001F3E6D44	2.330e-120	97.65	hypothetical protein n=1 Tax=Corynebacterium parak...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004000	Actin family	PRINTS	PR00190	ACTIN	coord: 50..61 score: 92.79 coord: 141..160 score: 96.3 coord: 62..84 score: 94.91 coord: 116..129 score: 97.31 coord: 27..36 score: 96.55
IPR004000	Actin family	SMART	SM00268	actin_3	coord: 6..170 e-value: 1.4E-13 score: 61.1
IPR004000	Actin family	PFAM	PF00022	Actin	coord: 4..170 e-value: 1.0E-67 score: 228.6
IPR004000	Actin family	PANTHER	PTHR11937	ACTIN	coord: 4..170
None	No IPR available	GENE3D	3.30.420.40		coord: 139..170 e-value: 9.8E-86 score: 289.6
None	No IPR available	GENE3D	3.30.420.40		coord: 9..138 e-value: 9.8E-86 score: 289.6
None	No IPR available	PANTHER	PTHR11937:SF397	ACTIN-57B-RELATED	coord: 4..170
None	No IPR available	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 147..170
None	No IPR available	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 4..154
IPR004001	Actin, conserved site	PROSITE	PS00406	ACTINS_1	coord: 54..64
IPR020902	Actin/actin-like conserved site	PROSITE	PS01132	ACTINS_ACT_LIKE	coord: 105..117

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig92931	contig	Ecto-sp8_S_contig92931:64..573 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig92931.30739.1	mRNA_Ecto-sp8_S_contig92931.30739.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig92931 64..573 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig92931.30739.1 ID=prot_Ecto-sp8_S_contig92931.30739.1|Name=mRNA_Ecto-sp8_S_contig92931.30739.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=170bp
MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQ
KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE
EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT
GIVLDSGDGVSHTVPIYEGY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004000	Actin
IPR004001	Actin_CS
IPR020902	Actin/actin-like_CS