prot_Ecto-sp8_S_contig9290.30735.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9290.30735.1
Unique Nameprot_Ecto-sp8_S_contig9290.30735.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length557
Homology
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 930 bits (2403), Expect = 0.000e+0
Identity = 468/557 (84.02%), Postives = 472/557 (84.74%), Query Frame = 0
Query:    1 MRFSKLVLPMLSVGVANAQKCSNGFPGIEKSGACCVSDCGTCGGSGCSSRKPGLTGDDCCTKNILKQGASCSATGHAPCFLDAGDSTPSKSTPTESDGFVYEGCFNDRPEPDRLFSYVTTMDDMTTELCANECKGYAFFGLQWGRECWCGTSDDYDKHGRVDDDSCDFQCSGDAEEICGGFYKMQTYAFEGSSSPSPTPPSSTAGRSFTCDGILKGDVCCSAGCGTCGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPKQTSPVPSPTXXXXXXXXXRXATPTPPTPVPSGCDTTATVQIDKDTAYFKSGGCATLTDLYNAQDGKGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKDLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV 557
            MRFSKLVLPMLSVGVA AQKCSNGFPGIEKSGACCVSDCGTCGGSGCSSR+ GLTGDDCCTKNILKQGA CSATGHAPCFLD GDSTPSKSTPTESDGFVYEGCFND+PEPDRLFSYVTTMDDMTTELCANECKGYAFFGLQWGRE                                                                           AGCGTCGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAP+QTSPVPSPT   XXXXXXR ATPTPPTPVPSGCDT ATVQIDKDTAYFKSGGCATLTDLYNAQDG GPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCK+LSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV
Sbjct:    1 MRFSKLVLPMLSVGVAAAQKCSNGFPGIEKSGACCVSDCGTCGGSGCSSRESGLTGDDCCTKNILKQGAPCSATGHAPCFLD-GDSTPSKSTPTESDGFVYEGCFNDKPEPDRLFSYVTTMDDMTTELCANECKGYAFFGLQWGRE---------------------------------------------------------------------------AGCGTCGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXRSATPTPPTPVPSGCDTKATVQIDKDTAYFKSGGCATLTDLYNAQDGTGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKNLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV 481          
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 1.490e-145
Identity = 269/537 (50.09%), Postives = 318/537 (59.22%), Query Frame = 0
Query:   27 GIEKSGACCVSDCGTCGGSGCSSRKPGLTGDDCCTKNILKQGASCSATGHAPCFLDAGDSTPSKSTPTESDGFVYEGCFNDRPEPDRLFSYVTTMDDMTTE--LCANECKGYAFFGLQWGRECWCGTSDDYDKHGRVDDDSCDFQCSGDAEEICGGFYKMQTYAFEGSSSPSPTPPSSTAGRSFTCDGILKGDVCCSAGCGTCGGTGCSQRP-GLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPKQTSPVPSPTXXXXXXXXXRXATPTPPTPVPSGCDTTATVQIDKDTAYFKSGGCATLTDLYNAQDGKGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYWEIFGHGGNMYFEGTKVTSWDTSKGKER-EYKKNEGRSFIRCITQYDDN--YSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKDLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV 557
            G+ K   CC + C  CGGSGCS R  GLTG DCCT +I      CS TG APC +D   S                G F              T D +      C+  C               CG S   D+ G +    C   C+ D   +C           +G +SP+          SFTCDG+LKGD CCSAGCG CGG        GLT +DCC   I     LCSVTG APC VDGDS     T P P+P XXXXXXXXX X              T A++    D++ F  GGCATLTD+YN Q G GPL+VLDS++N V G GGSA PTG WLLTS+++I D  TL+V G   GGD DVLRI+ST   +WEI G GG++ F  T VTSWDT KG+ER EY+   GRSFI C+TQ+DD+  +SCSG SNK+ G CRMDIIDSTMGNMG+  +ESYGLTWKVRGLC DLSN+++ D  NVYGDIK S+IYGMYYGMYSYGH+GGVWT+N M DN+ YGFDPHDDSD+L 
Sbjct:  163 GVLKGDYCCSAGCVECGGSGCSDRGGGLTGADCCTSDISNL---CSVTGAAPCIVDGDTSPTXXXXXXXXXXXXXSGSF--------------TCDGVLKGDYCCSAGCVE-------------CGGSGCSDRGGGLTGADC---CTSDISNLC-SVTGAAPCIVDGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCGECGGXXXXXXXXGLTGADCCTSDISN---LCSVTGAAPCIVDGDS-----TGPTPTPXXXXXXXXXXXXXX--------XXXGTIASISTSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQSTDDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYE--GGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLT 647          
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 1.000e-92
Identity = 152/269 (56.51%), Postives = 191/269 (71.00%), Query Frame = 0
Query:  300 TPVPSG---CDTTATVQIDKDTAYFKSGGCATLTDLYNAQDGKGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDN--YSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCK---DLS---NLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV 557
            TP PS    CD+ ATV+   D AYF+ GGC TLT +Y AQ+G GPL+VLD N++ V G      PTG WLL  N+++ D +TL V G    GD DVLR+ ST   + E+ G+GGN++F+ T VTSWDT  G+ERE+   +GRSFI C+TQ+DD+  + C G SN++ G CRMDII STMGNMG+  +ESYGLTWKVRG C+   D     N ++F+  NVYGDI NS+IYGMYYG YSYGH+GGVW +N M DN+QYGFDPHDDSD+L 
Sbjct:  169 TPTPSATTSCDSAATVRFTDDIAYFEGGGCGTLTQMYEAQEGDGPLYVLDENNDVVGGT-----PTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWD-GDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLT 431          
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 1.230e-90
Identity = 231/598 (38.63%), Postives = 306/598 (51.17%), Query Frame = 0
Query:   27 GIEKSGACCVSDCGTCGGSGCSSRKPGLTGDDCCTKNILKQGASCSATGHAPCFLDAGDSTPSKSTPTESDG--------FVYEGCFNDRPEPDRLFSYVTTMDD---MTTELCANECKGYAFFGLQWGRECWCGTSDDY-DKHGRVDDDSCDFQCSGDAEEICGGFYKMQTYAFEGSSSPSPTPPSSTAG----RSFTC------DGILKGD-------VCCSAGC----------GT-------CGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPKQTSPVPSPTXXXXXXXXXRXATPTPPTPVPSGCDTTATVQIDKDTAYFK----SG----------GCATLTDLYNAQ----DG--KGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKDLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV 557
            GI +   CCV++C TCGGSGCSSR             I   G SC   G APC +   D +PS                 + + GC+ D   PDR+ S  + M     MTT  CA+ C+G  +FG+Q+G EC+C +S D  D+ G  +D  C+  CSGD+ EICGG Y +Q Y +                     S  C      D +L GD       V  +A C          GT       C  +G S       S+C +    +S   C        ++  D  AP          XXXXXXXXX X        +    + +++   D+D   F+    SG          GC T+TDLYN +    DG  KGP+++LD +  K+D   G    T  WLL + + I      + +G   GGDC+ LRI+STGS  + E+ GHGG++YFE T VTSWDT   + +E  +N GRSF+ C+++      C G +  +MG CRMDII+S +  +GY  SESYG+TWKVRG CKDLSN ++F+  NVYGD+  SDI+ +YYG YSYGH+GGVWTNNKMHDN QYGFDPHDDSD L 
Sbjct:  103 GILQGDVCCVAECETCGGSGCSSRNXXXXXXXX-XXXIKAAGVSC---GEAPCIVT--DDSPSXXXXXXXXXXXXXXXXXYSFAGCYVD--SPDRVLSGDSMMSVNSVMTTAYCADFCEGSDYFGVQFGYECFCSSSGDTPDELGESED--CEMACSGDSSEICGGSYAIQVYEYSDXXXXXXXXXXXXXXXXXYESVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFCEGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVYMLEDGPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL---MEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGI---TNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEN-GRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLT 683          
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.440e-81
Identity = 142/241 (58.92%), Postives = 173/241 (71.78%), Query Frame = 0
Query:  324 GGCATLTDLY------NAQDGKGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIEST-GSKYWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKDLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV 557
            GGC TL+DLY      N  + KGP++VLDSND +VD    +   TG+WLLT+++ +   ATL+  GK  GG+C  LRI ST GS ++EI GHGGN+YFE T VTSWD    K +E  K +GRSFIRC+++          +N  MG CRMDIIDS MG +GYDASE+YG+TWKVRG C DLSN  +FD  NVYGD+K SDI+ MYYGMYS+GH+GGVWTNN MHDN QYGFDPHDDSD L+
Sbjct:    9 GGCFTLSDLYAWQGFYNNGNSKGPVFVLDSND-RVDET--ATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYK-DGRSFIRCVSEVLTGEDTCAINN--MGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLI 243          
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 1.990e-81
Identity = 144/243 (59.26%), Postives = 175/243 (72.02%), Query Frame = 0
Query:  320 YFKSGGCATLTDLYNAQDGK---GPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQY--DDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKDLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNL 556
            Y + GGCATLTD+Y AQ G    GPL+VLDSNDN V G+     PTG WLL  +I +E+ + L V G D GGD  VLRI+STGS+ Y+EI GHGG++ F  TKVTSWDT + K     K E RSFIRC+++   D   +C G +   MG CRMDII S MG MGYDA+ESYG++WKVRG C +  N ++F++  V GDI +SDIYGMYYG YS+GH+GG+WT NKMHDN QYGFDPHDDSDNL
Sbjct:  401 YIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVVGGS-----PTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKE-RSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNL 637          
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 8.750e-80
Identity = 155/357 (43.42%), Postives = 199/357 (55.74%), Query Frame = 0
Query:  212 GILKGDVCCSAGCGTCGGTGCSQR-PGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPKQTSPVPSPTXXXXXXXXXRXATPTPPTPVPSGCDTTATVQIDKDTAYFKSGGCATLTDLYNAQ---DG--KGPLWVLDSNDNKVDGAGGSAKP---TGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTG-SKYWEIFGHGGNMYFEGTKVTSWDT-SKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKDLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV 557
            G+   ++CC   CGTCGG+ C +R  GL  +DCC   I ++G LCS    APC +D                                               +  +T   +  GC T+TDLYN +   DG  KGP++ LD + N V        P   + +WLLT+ + I   A  +  G   GGDCD LRI+STG + + E+  HGG+MYFE T VTSWDT +K  +  Y    GRSF+ C+++      C G +  +MG CRMDII+S +G +GY  SESYGLTWKVRG CKDLSN  +FD  NVYG++  SDI+  YYG YSYGH+GGVW NN+MHDN QYGFDPHDDSD L 
Sbjct:   18 GVQSENICCHVDCGTCGGSECRRRGKGLGAADCCRNYISKNGALCSENLSAPCIMD----------------------------------------------DVTGNTPDAEGEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTV------LNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYV--GGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT 320          
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 1.560e-73
Identity = 122/215 (56.74%), Postives = 150/215 (69.77%), Query Frame = 0
Query:  344 VLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYW-EIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKDLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV 557
            +LD + NK+         T +WLL S + + D A  +  G + GGDCD LRI+STG   W E+ GHGG+MYF  T VTSWDT   K +E  +  GRSF+ C+++     +C G +  D G CRMDII+S MG MG+  +ESYGLTWKVRG CKDLSN  +F+  NVYGDIKNS+I+ MYYGMYSYGH+GGVWTNN+MHDN QYGFDPHDDSD L 
Sbjct:    1 MLDDSGNKITSP---TSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEG-GRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLT 211          
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 9.860e-71
Identity = 126/244 (51.64%), Postives = 160/244 (65.57%), Query Frame = 0
Query:  329 LTDLYN----AQDG--KGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWK--------VRGLCKDLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLV 557
            +TDLYN     +DG  KGP+++LD +  K+D   G    T  WLL + + I      + +G   GGDC+ LRI+STGS  + E+ GHGG++YFE T VTSWDT   KE +     GRSF+ C+++      C G +  +MG CRMDII+S +  +GY  SESYG+TWK        VRG CKDLSN ++FD  NVYGD+  SDI+ +YYG YSYGH+GGVWTNNKMHDN QYGFDPHDDSD L 
Sbjct:    1 MTDLYNFRGTEKDGSSKGPVYMLDDDGTKLDIPSGI---TNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPN-KEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLT 240          
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 5.560e-69
Identity = 126/240 (52.50%), Postives = 159/240 (66.25%), Query Frame = 0
Query:  322 KSGGCATLTDLYNAQ----DG--KGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYW-EIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVR---------GLCKDLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQY 545
            +S GC TLTDLYN +    DG  KGPL++LD + +K+         T +WLL + + + + A  +  G + GGDCD LRI+STG   W E+ GHGG+MYF  T VTSWDT   + +E  +  GRSF+ C+++     +C G +  DMG CRMDII+S MG MG+  SESYGLTWKVR         G CKDLSN  +F+  NVYGDIKNSDI+ MYYG YSYGH+GGVWTNN+MHDN QY
Sbjct:   18 ESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAP---TSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEG-GRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY 253          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9290.30735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRN0_ECTSI0.000e+084.02Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FWE8_ECTSI1.490e-14550.09Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7G8D9_ECTSI1.000e-9256.51Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LC73_ECTSI1.230e-9038.63Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FRR8_ECTSI1.440e-8158.92Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF5_9PHAE1.990e-8159.26MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D8LRM4_ECTSI8.750e-8043.42Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FIU4_ECTSI1.560e-7356.74Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE9.860e-7151.64MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JGU8_9PHAE5.560e-6952.50MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 98..190
e-value: 5.7E-9
score: 45.8
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 101..180
e-value: 9.4E-18
score: 64.2
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 98..190
score: 10.713
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 305..557
e-value: 4.5E-52
score: 179.2
NoneNo IPR availablePANTHERPTHR24269:SF19coord: 44..326
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 44..326
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..557
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.664

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9290contigEcto-sp8_S_contig9290:1982..7265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9290.30735.1mRNA_Ecto-sp8_S_contig9290.30735.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9290 1982..7265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9290.30735.1 ID=prot_Ecto-sp8_S_contig9290.30735.1|Name=mRNA_Ecto-sp8_S_contig9290.30735.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=557bp
MRFSKLVLPMLSVGVANAQKCSNGFPGIEKSGACCVSDCGTCGGSGCSSR
KPGLTGDDCCTKNILKQGASCSATGHAPCFLDAGDSTPSKSTPTESDGFV
YEGCFNDRPEPDRLFSYVTTMDDMTTELCANECKGYAFFGLQWGRECWCG
TSDDYDKHGRVDDDSCDFQCSGDAEEICGGFYKMQTYAFEGSSSPSPTPP
SSTAGRSFTCDGILKGDVCCSAGCGTCGGTGCSQRPGLTDSDCCIGKIEE
SGPLCSVTGKAPCFVDGDSSAPKQTSPVPSPTPKTSPSSTPRSATPTPPT
PVPSGCDTTATVQIDKDTAYFKSGGCATLTDLYNAQDGKGPLWVLDSNDN
KVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGS
KYWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDN
YSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKDLSNL
KLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPH
DDSDNLV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
IPR012334Pectin_lyas_fold