prot_Ecto-sp8_S_contig92869.30727.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp8_S_contig92869.30727.1
Unique Name	prot_Ecto-sp8_S_contig92869.30727.1
Type	polypeptide
Organism	Ectocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length	103

Homology

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: UPI001592B17F (phasin family protein n=1 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001592B17F)

HSP 1 Score: 193 bits (490), Expect = 2.950e-61
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMF KQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKE+KKAA
Sbjct:   70 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFAKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKEMKKAA 171

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: A0A2M7LG62_9SPHN (Phasin_2 domain-containing protein n=1 Tax=Sphingomonadales bacterium CG_4_10_14_3_um_filter_58_15 TaxID=1974093 RepID=A0A2M7LG62_9SPHN)

HSP 1 Score: 195 bits (496), Expect = 1.180e-60
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            NVETL+ESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA
Sbjct:  183 NVETLIESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 284

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: A0A2G2D1F6_9SPHN (Phasin_2 domain-containing protein n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2D1F6_9SPHN)

HSP 1 Score: 191 bits (486), Expect = 4.210e-59
Identity = 98/102 (96.08%), Postives = 102/102 (100.00%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            NVETL+ESGKIAAKGAQEIG+TNVKYTRENFVEASRALQGLFSVATPKD+FEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRK+LKKAA
Sbjct:  186 NVETLIESGKIAAKGAQEIGQTNVKYTRENFVEASRALQGLFSVATPKDLFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKDLKKAA 287

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: A0A127MD02_9SPHN (Phasin_2 domain-containing protein n=5 Tax=unclassified Sphingorhabdus TaxID=2614947 RepID=A0A127MD02_9SPHN)

HSP 1 Score: 190 bits (482), Expect = 1.700e-58
Identity = 99/102 (97.06%), Postives = 100/102 (98.04%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            NVETLLESGKIAAKGAQEIGKTNV+YTRENFVEASRALQGLFSVATPKDMF KQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELK AA
Sbjct:  186 NVETLLESGKIAAKGAQEIGKTNVEYTRENFVEASRALQGLFSVATPKDMFAKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKAAA 287

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: A0A1B6Z8J3_9SPHN (Phasin_2 domain-containing protein n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z8J3_9SPHN)

HSP 1 Score: 183 bits (465), Expect = 4.610e-56
Identity = 92/102 (90.20%), Postives = 98/102 (96.08%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            N+ETL+E+GKI AKGAQEIGKTN+KYTREN  EASRALQGLFSVATPKDMF KQADY+RSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSE+RKELKKAA
Sbjct:  175 NIETLIETGKITAKGAQEIGKTNLKYTRENMTEASRALQGLFSVATPKDMFAKQADYMRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEVRKELKKAA 276

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: A0A6H2DMM9_9SPHN (Phasin family protein n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DMM9_9SPHN)

HSP 1 Score: 176 bits (445), Expect = 2.080e-54
Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            N+ETL+E+GKI  KG QEIGKTN+KYTRENFVEASRALQGLFSVATPKD  EKQ DYVRSGLDR+MDQTSNNADAVVKLAGKAYQPIADR+ EI+K++KKAA
Sbjct:   70 NIETLIETGKITVKGVQEIGKTNMKYTRENFVEASRALQGLFSVATPKDFIEKQTDYVRSGLDRIMDQTSNNADAVVKLAGKAYQPIADRLGEIQKDMKKAA 171

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: UPI001AA0A0BD (TIGR01841 family phasin n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001AA0A0BD)

HSP 1 Score: 176 bits (445), Expect = 6.800e-53
Identity = 86/102 (84.31%), Postives = 96/102 (94.12%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            N+ETL+ESGKI AKGAQEIGKTN+KYTRENFVEASRALQG+FSVATPKD F+KQ DY+R+G+DRV+DQTSNN DAV KLAGKAYQPIADRVS IRKE+KKAA
Sbjct:  187 NIETLIESGKITAKGAQEIGKTNLKYTRENFVEASRALQGVFSVATPKDFFDKQTDYLRNGMDRVVDQTSNNVDAVTKLAGKAYQPIADRVSTIRKEMKKAA 288

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: UPI001E5B0F10 (phasin family protein n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=UPI001E5B0F10)

HSP 1 Score: 159 bits (403), Expect = 2.000e-46
Identity = 81/102 (79.41%), Postives = 89/102 (87.25%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            NVETL+ESGKI A+GAQEIGKTNVKYTRENF EAS  L+  F+VATPKD  E QAD++RS LDRVM+QTSNN DAV KLAGKAYQPIADRVS IRKE+KKAA
Sbjct:  199 NVETLVESGKITAQGAQEIGKTNVKYTRENFAEASNVLKSSFNVATPKDFVEMQADFMRSSLDRVMEQTSNNMDAVTKLAGKAYQPIADRVSTIRKEIKKAA 300

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: A0A1N6D6M4_9SPHN (Phasin family protein n=1 Tax=Parasphingorhabdus marina DSM 22363 TaxID=1123272 RepID=A0A1N6D6M4_9SPHN)

HSP 1 Score: 127 bits (319), Expect = 4.330e-34
Identity = 68/102 (66.67%), Postives = 75/102 (73.53%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            NVE L+ESGKI                     EASR L+ LFSVATP+D FEKQADY+RS LDRVMDQTS+NADAV K+AGKAYQPIADRVS+IRKELKKAA
Sbjct:  174 NVEALVESGKIXXXXXXXXXXXXXXXXXXXLTEASRVLKDLFSVATPRDFFEKQADYMRSNLDRVMDQTSSNADAVTKIAGKAYQPIADRVSDIRKELKKAA 275

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BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Match: A0A848STE2_9SPHN (TIGR01841 family phasin n=1 Tax=Sphingomonadaceae bacterium TaxID=1930536 RepID=A0A848STE2_9SPHN)

HSP 1 Score: 102 bits (253), Expect = 3.950e-25
Identity = 48/102 (47.06%), Postives = 71/102 (69.61%), Query Frame = 0

Query:    1 NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDMFEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKKAA 102
            N+E ++ESGKIAAKG Q+I K N ++ REN   AS A+QG+ SV +P+D FE Q +  R+G D  + Q S+N +A +KL  +A+QPI++R+S   +  +KAA
Sbjct:   84 NIEAMVESGKIAAKGMQDIAKQNAEFARENLENASNAMQGMVSVKSPRDFFEAQNERTRAGFDTFVSQASHNTEAFMKLVSEAFQPISNRMSTAVENFRKAA 185

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot

BLAST of mRNA_Ecto-sp8_S_contig92869.30727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001592B17F	2.950e-61	98.04	phasin family protein n=1 Tax=Parasphingorhabdus f...	[more]
A0A2M7LG62_9SPHN	1.180e-60	99.02	Phasin_2 domain-containing protein n=1 Tax=Sphingo...	[more]
A0A2G2D1F6_9SPHN	4.210e-59	96.08	Phasin_2 domain-containing protein n=1 Tax=Sphingo...	[more]
A0A127MD02_9SPHN	1.700e-58	97.06	Phasin_2 domain-containing protein n=5 Tax=unclass...	[more]
A0A1B6Z8J3_9SPHN	4.610e-56	90.20	Phasin_2 domain-containing protein n=1 Tax=Sphingo...	[more]
A0A6H2DMM9_9SPHN	2.080e-54	84.31	Phasin family protein n=1 Tax=Parasphingorhabdus h...	[more]
UPI001AA0A0BD	6.800e-53	84.31	TIGR01841 family phasin n=1 Tax=Parasphingorhabdus...	[more]
UPI001E5B0F10	2.000e-46	79.41	phasin family protein n=2 Tax=Sphingomonadaceae Ta...	[more]
A0A1N6D6M4_9SPHN	4.330e-34	66.67	Phasin family protein n=1 Tax=Parasphingorhabdus m...	[more]
A0A848STE2_9SPHN	3.950e-25	47.06	TIGR01841 family phasin n=1 Tax=Sphingomonadaceae ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010127	Phasin, subfamily 1	TIGRFAM	TIGR01841	TIGR01841	coord: 12..98 e-value: 7.9E-9 score: 33.9
IPR018968	Phasin	PFAM	PF09361	Phasin_2	coord: 1..91 e-value: 3.8E-19 score: 68.8

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp8_S_contig92869	contig	Ecto-sp8_S_contig92869:304..612 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species8 EcLAC_412 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp8_S_contig92869.30727.1	mRNA_Ecto-sp8_S_contig92869.30727.1	Ectocarpus species8 EcLAC_412	mRNA	Ecto-sp8_S_contig92869 304..612 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp8_S_contig92869.30727.1 ID=prot_Ecto-sp8_S_contig92869.30727.1|Name=mRNA_Ecto-sp8_S_contig92869.30727.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=103bp
NVETLLESGKIAAKGAQEIGKTNVKYTRENFVEASRALQGLFSVATPKDM
FEKQADYVRSGLDRVMDQTSNNADAVVKLAGKAYQPIADRVSEIRKELKK
AA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010127	Phasin_subfam-1
IPR018968	Phasin