prot_Ecto-sp8_S_contig9283.30720.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9283.30720.1
Unique Nameprot_Ecto-sp8_S_contig9283.30720.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length101
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9283.30720.1 vs. uniprot
Match: D8LR47_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR47_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 5.780e-64
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0 
Query:    1 MKSSVLLAAGMVVGSVQASPSAPMRFMEHLHGSGVDSQSPDRGGEGLQLYVSKRAWVEDRACTRLSRTPHLITTSQSTWFPTAVEMAEGFYSADVAALAC 100
            MKSSVLLAAG+VVGSVQASPSAPMRFMEHLHGSGVDSQSPDRGGEGLQLYVSKRAWVEDRACTRLSRTPHLITTSQSTWFPTAVEMAEGFYSADVAALAC
Sbjct:    1 MKSSVLLAAGIVVGSVQASPSAPMRFMEHLHGSGVDSQSPDRGGEGLQLYVSKRAWVEDRACTRLSRTPHLITTSQSTWFPTAVEMAEGFYSADVAALAC 100
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BLAST of mRNA_Ecto-sp8_S_contig9283.30720.1 vs. uniprot
Match: A0A836CCQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCQ4_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 4.200e-5
Identity = 34/101 (33.66%), Postives = 52/101 (51.49%), Query Frame = 0 
Query:    1 MKSSVLLAAGMVVGSVQASPSAPMRFMEHLHGSGVDSQSPDRGGEGLQLYVSKRAWVEDRACTRLSRTPHLITTSQSTWFPTAVEMAEGFYS-ADVAALAC 100
            M+  V+L    +  + + +P   +  + HLH  G    S D  G   +L VSK A+++ RAC+R+  + HL  + Q+        M EGFYS ADV A+ C
Sbjct:    1 MRIVVVLMLCALASNAEETPPKTLDALHHLHSGG---SSVDNSGSASRLGVSKGAYLDQRACSRMQASKHLTWSWQN--------MYEGFYSSADVNAVFC 90
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9283.30720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LR47_ECTSI5.780e-6499.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CCQ4_9STRA4.200e-533.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..100
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.577

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9283contigEcto-sp8_S_contig9283:928..3530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9283.30720.1mRNA_Ecto-sp8_S_contig9283.30720.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9283 677..5715 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9283.30720.1 ID=prot_Ecto-sp8_S_contig9283.30720.1|Name=mRNA_Ecto-sp8_S_contig9283.30720.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=101bp
MKSSVLLAAGMVVGSVQASPSAPMRFMEHLHGSGVDSQSPDRGGEGLQLY
VSKRAWVEDRACTRLSRTPHLITTSQSTWFPTAVEMAEGFYSADVAALAC
*
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