prot_Ecto-sp8_S_contig92579.30674.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92579.30674.1
Unique Nameprot_Ecto-sp8_S_contig92579.30674.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length72
Homology
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A6H5L3L3_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L3_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.620e-35
Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    1 RPYQSRIASACEGENTLVVLPTGSGKTIIAAEVIKQRLPRALFLVPTRHLVEQQAKALRAWTFHSRIAQLRG 72
            RPYQSRIA ACE +NTLVVLPTGSGKTIIAAEVIKQR PRALFLVPTRHLV+QQAK LRAWTF  RIAQLRG
Sbjct:   49 RPYQSRIARACERDNTLVVLPTGSGKTIIAAEVIKQRPPRALFLVPTRHLVKQQAKVLRAWTFRRRIAQLRG 120          
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A6H5KX57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX57_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 8.630e-18
Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 RPYQSRIASACEGENTLVVLPTGSGKTIIAAEVIKQRLPRALFLVPTRHLVEQQAKALRAWT 62
            R YQSRIA+ C  +NT+VVLPTGSGKT++AAE IK+  P ALFLVPTR +V+QQA+AL +WT
Sbjct:   25 RGYQSRIANKCLHDNTIVVLPTGSGKTLLAAEAIKRLGPPALFLVPTRLMVDQQAEALGSWT 86          
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A2V3IZ19_9FLOR (Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ19_9FLOR)

HSP 1 Score: 75.1 bits (183), Expect = 3.850e-14
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    1 RPYQSRIASACEGENTLVVLPTGSGKTIIAAEVIKQRLPRALFLVPTRHLVEQQAKALRAWTFHSRIAQLRG 72
            RPYQ RI      +NTLVVLPTG+GKT+IA EVI+   P ALF+VPT  LV+QQ++A+ A T + ++AQL G
Sbjct:   15 RPYQQRIIDQAVLKNTLVVLPTGAGKTLIATEVIRTLSPPALFIVPTVLLVKQQSEAIAAHTNY-KVAQLHG 85          
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A7S4V2U7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V2U7_9DINO)

HSP 1 Score: 75.1 bits (183), Expect = 3.880e-14
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 RPYQSRIASACEGE-NTLVVLPTGSGKTIIAAEVIKQRLPRALFLVPTRHLVEQQAKALRAWT 62
            RPYQSRI    E   NT+VVLPTG+GKT+IAAE+IK+     LFLVPT  LVEQQAKA+  WT
Sbjct:    4 RPYQSRIVGQAEASGNTVVVLPTGAGKTLIAAELIKRVGGTCLFLVPTCLLVEQQAKAVGKWT 66          
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A812RBN0_9DINO (DCL2A protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RBN0_9DINO)

HSP 1 Score: 73.2 bits (178), Expect = 1.850e-13
Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    1 RPYQSRIAS-ACEGENTLVVLPTGSGKTIIAAEVIKQRLPRALFLVPTRHLVEQQAKALRAWTFHSRIAQLRG 72
            R YQ RI   A    NT+VVLPTG+GKT+IA+E++K+  P  LFLVPT  LVEQQAKA+R WT   R+A+  G
Sbjct:   20 RGYQQRIVDDALTTGNTIVVLPTGAGKTLIASELMKRLGPGCLFLVPTCLLVEQQAKAIREWT-GLRVAEFMG 91          
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A1Q9EU77_SYMMI (Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EU77_SYMMI)

HSP 1 Score: 70.9 bits (172), Expect = 1.200e-12
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 RPYQSRIASACEGE-NTLVVLPTGSGKTIIAAEVIKQRLPRALFLVPTRHLVEQQAKALRAWT 62
            R YQ+R+        NTLVVLPTG+GKT+IA+E+I++  P  LFLVPT  LVEQQAKA+R WT
Sbjct:    4 RAYQARLLEEILASGNTLVVLPTGAGKTLIASELIRRLGPPCLFLVPTCLLVEQQAKAVRDWT 66          
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A812TEW1_9DINO (DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TEW1_9DINO)

HSP 1 Score: 70.9 bits (172), Expect = 1.220e-12
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 RPYQSRIASACEGE-NTLVVLPTGSGKTIIAAEVIKQRLPRALFLVPTRHLVEQQAKALRAWT 62
            R YQ+R+        NTLVVLPTG+GKT+IA+E+I++  P  LFLVPT  LVEQQAKA+R WT
Sbjct:    4 RAYQARLLEEILASGNTLVVLPTGAGKTLIASELIRRLGPPCLFLVPTCLLVEQQAKAVRDWT 66          
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A534HPZ1_9EURY (DEAD/DEAH box helicase n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A534HPZ1_9EURY)

HSP 1 Score: 68.9 bits (167), Expect = 5.700e-12
Identity = 42/76 (55.26%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 RPYQSRIASACEGENTLVVLPTGSGKTIIAAEVIKQRLPR----ALFLVPTRHLVEQQAKALRAWTFHSRIAQLRG 72
            R YQ  IA AC   +TLVVLPTG GKT+IAA VI + L R     LFL PT+ LVEQ A +LRA+    RIA   G
Sbjct:   25 RAYQVNIARACLERSTLVVLPTGMGKTVIAAIVIAEVLRRHGGKVLFLAPTKPLVEQHAASLRAFLVVDRIALFTG 100          
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A497T833_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Aenigmarchaeota archaeon TaxID=2093792 RepID=A0A497T833_9ARCH)

HSP 1 Score: 68.6 bits (166), Expect = 7.670e-12
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    1 RPYQSRIASACEGENTLVVLPTGSGKTIIAAEVIKQRLP--RALFLVPTRHLVEQQAKALRAWTFHSRIAQLRG 72
            RPYQ RIAS    +NTLVVLPTG GKT+IA EV K+RL   + L L PTR LVEQ  K+       S++ Q++G
Sbjct:    4 RPYQERIASVALKQNTLVVLPTGLGKTLIAIEVAKKRLELGKVLVLAPTRPLVEQHQKSF------SQVLQVQG 71          
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Match: A0A1G0A7D8_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon RBG_19FT_COMBO_69_17 TaxID=1797984 RepID=A0A1G0A7D8_9EURY)

HSP 1 Score: 68.2 bits (165), Expect = 1.060e-11
Identity = 41/76 (53.95%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    1 RPYQSRIASACEGENTLVVLPTGSGKTIIAAEVIKQRLPRA----LFLVPTRHLVEQQAKALRAWTFHSRIAQLRG 72
            R YQ  IA AC G  TLVVLPTG GKT++AA VI + L R     LFL PT+ LVEQ A +LR      RIA   G
Sbjct:   16 RAYQVNIAKACLGRPTLVVLPTGMGKTVVAAMVIAETLRRKGGRILFLAPTKPLVEQHAASLRDILIVDRIALFTG 91          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92579.30674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3L3_9PHAE1.620e-3588.89Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5KX57_9PHAE8.630e-1867.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2V3IZ19_9FLOR3.850e-1456.94Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis... [more]
A0A7S4V2U7_9DINO3.880e-1465.08Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A812RBN0_9DINO1.850e-1357.53DCL2A protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A1Q9EU77_SYMMI1.200e-1260.32Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodiniu... [more]
A0A812TEW1_9DINO1.220e-1260.32DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A534HPZ1_9EURY5.700e-1255.26DEAD/DEAH box helicase n=1 Tax=Euryarchaeota archa... [more]
A0A497T833_9ARCH7.670e-1254.05Uncharacterized protein n=1 Tax=Candidatus Aenigma... [more]
A0A1G0A7D8_9EURY1.060e-1153.95Uncharacterized protein n=1 Tax=Euryarchaeota arch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 4..62
e-value: 4.8E-10
score: 39.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..72
e-value: 1.7E-20
score: 75.3
NoneNo IPR availablePANTHERPTHR14074HELICASE WITH DEATH DOMAIN-RELATEDcoord: 1..60
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 7..72
score: 12.408
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92579contigEcto-sp8_S_contig92579:102..317 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92579.30674.1mRNA_Ecto-sp8_S_contig92579.30674.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92579 102..317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92579.30674.1 ID=prot_Ecto-sp8_S_contig92579.30674.1|Name=mRNA_Ecto-sp8_S_contig92579.30674.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=72bp
RPYQSRIASACEGENTLVVLPTGSGKTIIAAEVIKQRLPRALFLVPTRHL
VEQQAKALRAWTFHSRIAQLRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase