prot_Ecto-sp8_S_contig92545.30670.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92545.30670.1
Unique Nameprot_Ecto-sp8_S_contig92545.30670.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length43
Homology
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BLAST of mRNA_Ecto-sp8_S_contig92545.30670.1 vs. uniprot
Match: D8LB49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB49_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.420e-8
Identity = 27/28 (96.43%), Postives = 28/28 (100.00%), Query Frame = 0 
Query:    1 FRYPARPDALVFRSFKLKVDAGTTVALV 28
            FRYPARP+ALVFRSFKLKVDAGTTVALV
Sbjct: 1124 FRYPARPNALVFRSFKLKVDAGTTVALV 1151
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92545.30670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LB49_ECTSI1.420e-896.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..28
e-value: 1.1E-6
score: 28.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92545contigEcto-sp8_S_contig92545:489..617 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92545.30670.1mRNA_Ecto-sp8_S_contig92545.30670.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92545 489..617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92545.30670.1 ID=prot_Ecto-sp8_S_contig92545.30670.1|Name=mRNA_Ecto-sp8_S_contig92545.30670.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=43bp
FRYPARPDALVFRSFKLKVDAGTTVALVRLAIEPVPCSFRWE*
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