prot_Ecto-sp8_S_contig92513.30664.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92513.30664.1
Unique Nameprot_Ecto-sp8_S_contig92513.30664.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length72
Homology
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: D7FJV0_ECTSI (Ribosome production factor 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJV0_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 4.620e-33
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0
Query:    1 PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLL 65
            P+ +  GRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLL
Sbjct:  100 PNNVVLGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLL 164          
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: A0A835ZC15_9STRA (Ribosome production factor 2 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC15_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 7.030e-20
Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    1 PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLL 65
            P+ +  GRTFDGH+LDM+E+G+  YRG+ E  G AKRVGSKPA +F G+ W  EE YRKL+NLL+
Sbjct:  100 PNNIVLGRTFDGHILDMMEMGVTAYRGIDEFRGSAKRVGSKPAMLFEGDLWENEEKYRKLRNLLI 164          
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: A0A482RIR7_9ARCH (Brix domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RIR7_9ARCH)

HSP 1 Score: 80.5 bits (197), Expect = 2.600e-18
Identity = 37/65 (56.92%), Postives = 49/65 (75.38%), Query Frame = 0
Query:    6 QGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLLGEEWR 70
            QGR +DGH+LDMIELG+V Y  +G++ G  K +GS P FVF+G++W RE   +KL+NLLLG  WR
Sbjct:    2 QGRMYDGHVLDMIELGIVGYTPMGDIEGSKKLIGSYPCFVFAGDQWDRELTNKKLKNLLLGA-WR 65          
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: A0A7S2KRS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRS7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.560e-14
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    1 PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAK-RVGSKPAFVFSGEKWGREEAYRKLQNLLL 65
            P+ L  GRTFD  +LDM+ELG++QYR +G+  GL K RVGSKP   F G+ W  +   ++LQNLL+
Sbjct:   23 PNNLVMGRTFDRRVLDMVELGILQYRSVGDFPGLPKQRVGSKPLLQFVGDVWSSDINLKRLQNLLI 88          
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: A0A812ZXI9_SYMMI (Ribosome production factor 2 homolog (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZXI9_SYMMI)

HSP 1 Score: 69.3 bits (168), Expect = 3.550e-13
Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    1 PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLL 65
            PH +  GR +DGH+LDM+ELG+  +RG+       K VGSKP  +F G++W  + +  ++QNL +
Sbjct:   48 PHNMIMGRMYDGHLLDMVELGISSFRGIESFLSRTKAVGSKPVMMFLGDEWESDSSLGRVQNLFI 112          
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: A0A7S2PBH5_9STRA (Ribosome production factor 2 homolog n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PBH5_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 6.430e-13
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAK-RVGSKPAFVFSGEKWGREEAYRKLQNLLL 65
            P  L  GR FD  +LDM+ELG+VQY+GL +  G  K RVGSKP   F G+ W  +E  +KLQNLLL
Sbjct:   58 PSNLVLGRLFDHQILDMVELGVVQYKGLKDYRGAPKKRVGSKPMMCFIGDVWHLDEEMKKLQNLLL 123          
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: A0A8J5AI60_9CHEL (Ribosome production factor 2 homolog n=2 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5AI60_9CHEL)

HSP 1 Score: 71.6 bits (174), Expect = 6.440e-13
Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    1 PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEKWGREEAYRKLQNLLLGE 67
            PH +  GRT+D HMLDM+ELGL +Y+GL +  G    + +KP  VFSGE + ++  +++L++LLLG+
Sbjct:  417 PHNIVIGRTYDYHMLDMVELGLEEYKGLSDFKGSKIPLSTKPMLVFSGETFQQDPEFKRLKSLLLGD 483          
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: A0A485KVE8_9STRA (Ribosome production factor 2 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVE8_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.100e-12
Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 0
Query:    1 PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAKRV-GSKPAFVFSGEKWGREEAYRKLQNLLL 65
            P+ +  GRTFDGH++DM+E+G   ++ + E    +K   GSKP F+FSGE+W   E Y+KL+N+L+
Sbjct:  129 PNNMIFGRTFDGHIMDMLEMGFENFKSIDEFKCKSKMAPGSKPCFLFSGEEWEAHEQYQKLKNILV 194          
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: F0W9T3_9STRA (Ribosome production factor 2 homolog n=2 Tax=Albugo TaxID=65356 RepID=F0W9T3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 3.950e-12
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAKR-VGSKPAFVFSGEKWGREEAYRKLQNLLL 65
            P     GRTFDGH+LDM+EL +  Y+ +   +   K+ VGSKP F+F+G +W   E Y+KL+NLLL
Sbjct:  108 PQNCVLGRTFDGHVLDMMELEISNYKAMATFSSDRKKAVGSKPCFIFTGSEWETLETYQKLKNLLL 173          
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Match: A0A6G0XKQ4_9STRA (Ribosome production factor 2 homolog n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKQ4_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.060e-12
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    1 PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAKRV-GSKPAFVFSGEKWGREEAYRKLQNLLL 65
            P+ L  GRTFDGH++DM+E+G   ++ + E    +K   GSKP F+FSG++W   E Y+KL+N+ L
Sbjct:  117 PNNLIFGRTFDGHIMDMLEMGFENFKSISEFKCKSKMAPGSKPCFLFSGDEWESNEVYQKLKNVFL 182          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92513.30664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJV0_ECTSI4.620e-3392.31Ribosome production factor 2 homolog n=2 Tax=Ectoc... [more]
A0A835ZC15_9STRA7.030e-2060.00Ribosome production factor 2 homolog n=1 Tax=Tribo... [more]
A0A482RIR7_9ARCH2.600e-1856.92Brix domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S2KRS7_9STRA1.560e-1451.52Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A812ZXI9_SYMMI3.550e-1341.54Ribosome production factor 2 homolog (Fragment) n=... [more]
A0A7S2PBH5_9STRA6.430e-1354.55Ribosome production factor 2 homolog n=1 Tax=Lepto... [more]
A0A8J5AI60_9CHEL6.440e-1346.27Ribosome production factor 2 homolog n=2 Tax=Nymph... [more]
A0A485KVE8_9STRA3.100e-1245.45Ribosome production factor 2 homolog n=1 Tax=Aphan... [more]
F0W9T3_9STRA3.950e-1248.48Ribosome production factor 2 homolog n=2 Tax=Albug... [more]
A0A6G0XKQ4_9STRA4.060e-1245.45Ribosome production factor 2 homolog n=1 Tax=Aphan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039770Ribosome biogenesis protein Rpf2PANTHERPTHR12728BRIX DOMAIN CONTAINING PROTEINcoord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92513contigEcto-sp8_S_contig92513:11..226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92513.30664.1mRNA_Ecto-sp8_S_contig92513.30664.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92513 11..226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92513.30664.1 ID=prot_Ecto-sp8_S_contig92513.30664.1|Name=mRNA_Ecto-sp8_S_contig92513.30664.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=72bp
PHGLEQGRTFDGHMLDMIELGLVQYRGLGELAGLAKRVGSKPAFVFSGEK
WGREEAYRKLQNLLLGEEWRDK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039770Rpf2