prot_Ecto-sp8_S_contig925.30660.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig925.30660.1
Unique Nameprot_Ecto-sp8_S_contig925.30660.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length63
Homology
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BLAST of mRNA_Ecto-sp8_S_contig925.30660.1 vs. uniprot
Match: D8LFH9_ECTSI (FirrV-1-A34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH9_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 4.210e-10
Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0 
Query:    2 PSDAVIEVKYHNRRKHGLGQVLAYQPHYPRLA 33
            PSDAVIEVKYHNR K GLGQVLAYQ HYPRLA
Sbjct:   75 PSDAVIEVKYHNRWKDGLGQVLAYQSHYPRLA 106
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig925.30660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFH9_ECTSI4.210e-1090.63FirrV-1-A34 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig925contigEcto-sp8_S_contig925:13189..13377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig925.30660.1mRNA_Ecto-sp8_S_contig925.30660.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig925 13052..13596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig925.30660.1 ID=prot_Ecto-sp8_S_contig925.30660.1|Name=mRNA_Ecto-sp8_S_contig925.30660.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=63bp
MPSDAVIEVKYHNRRKHGLGQVLAYQPHYPRLAGVCTSLRTSEIKIPTST
SRWRSQCVMRTR*
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