prot_Ecto-sp8_S_contig92492.30657.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92492.30657.1
Unique Nameprot_Ecto-sp8_S_contig92492.30657.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length110
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92492.30657.1 vs. uniprot
Match: D7G0Z4_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z4_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 3.420e-67
Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0 
Query:    1 QLVENSGGFRTFSSRVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIAS 110
            +LVE+SGGFRTFSSRVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIAS
Sbjct:   67 ELVEDSGGFRTFSSRVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIAS 176
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92492.30657.1 vs. uniprot
Match: A0A4D9CVN7_9STRA (START domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVN7_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 6.680e-12
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0 
Query:   21 SLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKR 103
            +++LRG+ +VD HI  + T FLNT+ + +WV +L   EELPT       G  +  +++Q +DMP P+ DRE ++RR+V  D+R
Sbjct:  161 TISLRGQASVDHHIAEVLTVFLNTSLSTEWVSYLDHAEELPT-------GQENAHIIYQFFDMPLPLSDREFLMRRTVVSDRR 236
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92492.30657.1 vs. uniprot
Match: A0A6H5L2R4_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R4_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 6.670e-8
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 0 
Query:   83 MPWPVKDREVVIRRSVRLDKRAKKMIAS 110
            MPWPVKDREVVIRRSVRLDKRAKKMIAS
Sbjct:    1 MPWPVKDREVVIRRSVRLDKRAKKMIAS 28
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92492.30657.1 vs. uniprot
Match: UPI001D17CC2B (START domain-containing protein n=2 Tax=Marinobacter TaxID=2742 RepID=UPI001D17CC2B)

HSP 1 Score: 56.2 bits (134), Expect = 4.270e-7
Identity = 36/95 (37.89%), Postives = 46/95 (48.42%), Query Frame = 0 
Query:    1 QLVENSGGFRTFSSRVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIR 95
            QL E S G R +++ V GS   A R    +D    RL    +N  S  +WV   VE E   +      GG GD    +   DMPWPV+DR+ VIR
Sbjct:   35 QLREESDGIRIYTTAVPGSDFEAFRAVADLDASTSRLMAVLVNPASCTEWVHNCVESEAFGS------GGFGDR-YAYSVNDMPWPVQDRDYVIR 122
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92492.30657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0Z4_ECTSI3.420e-6798.18START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A4D9CVN7_9STRA6.680e-1240.96START domain-containing protein n=2 Tax=Monodopsid... [more]
A0A6H5L2R4_9PHAE6.670e-8100.00START domain-containing protein n=1 Tax=Ectocarpus... [more]
UPI001D17CC2B4.270e-737.89START domain-containing protein n=2 Tax=Marinobact... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 1..109
e-value: 1.4E-12
score: 49.2
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 2..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92492contigEcto-sp8_S_contig92492:275..604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92492.30657.1mRNA_Ecto-sp8_S_contig92492.30657.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92492 275..604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92492.30657.1 ID=prot_Ecto-sp8_S_contig92492.30657.1|Name=mRNA_Ecto-sp8_S_contig92492.30657.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=110bp
QLVENSGGFRTFSSRVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDW
VRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRL
DKRAKKMIAS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf