prot_Ecto-sp8_S_contig9248.30655.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9248.30655.1
Unique Nameprot_Ecto-sp8_S_contig9248.30655.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length97
Homology
BLAST of mRNA_Ecto-sp8_S_contig9248.30655.1 vs. uniprot
Match: D7FLU6_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU6_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 7.400e-59
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
Query:    1 LQTVLSGVGEGYIPYSEADKSAIEELVVELETSSGQGTEVQFPRDLGKLDGRWRLVFTNNLVGLGRLSPVELRDVYQVVDSAAGLVSNVVYATMSPP 97
            LQTVLSGVGEGYIPYSEADKSAIEELVVELETSSGQGTEVQFPRDLGKLDGRWRLVFTNNLVGLGRLSPVELRDVYQVVDSAAGLVSNVVYATMSPP
Sbjct:   86 LQTVLSGVGEGYIPYSEADKSAIEELVVELETSSGQGTEVQFPRDLGKLDGRWRLVFTNNLVGLGRLSPVELRDVYQVVDSAAGLVSNVVYATMSPP 182          
BLAST of mRNA_Ecto-sp8_S_contig9248.30655.1 vs. uniprot
Match: A0A836CAZ2_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAZ2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.060e-23
Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    1 LQTVLSGVGEGYIPYSEADKSAIEELVVELETSSGQGTEVQFPRDLGKLDGRWRLVFTNNLVGLGRLSPVELRDVYQVVDSAAGLVSNVVYATMSPP 97
            L  + SGVG+GY   S +    I++ +V+LETS G    V+FP D   LDGRW+L++++N+ G+GRLSP+ L +VYQVVD+A   + NVVYAT+SPP
Sbjct:   65 LSAIGSGVGKGYYMTSRSAAKDIKKAIVDLETS-GADMAVKFPSDFATLDGRWKLLYSSNIFGVGRLSPLTLDEVYQVVDTAGNSIKNVVYATLSPP 160          
BLAST of mRNA_Ecto-sp8_S_contig9248.30655.1 vs. uniprot
Match: A0A835ENR3_9POAL (PAP_fibrillin domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835ENR3_9POAL)

HSP 1 Score: 51.6 bits (122), Expect = 1.810e-5
Identity = 35/99 (35.35%), Postives = 51/99 (51.52%), Query Frame = 0
Query:    3 TVLSGVGEGYIPYSEADKSAIEELVVELETSSGQGTEVQFPRDLGKLDGRWRLVFTNNLVG----LGRLSPVELRDVYQVVDSAAGLVSNVVYATMSPP 97
            + +SG+  G +  SE D S  +    ELE ++G G  V   RDL KL GRWRLV+++         GRL P+ L  V+Q +D  +    N+V   +  P
Sbjct:  226 SAVSGLNRG-LAASEEDLSRADAAARELEAAAG-GEPVDLERDLDKLQGRWRLVYSSAFSRPGPPTGRLLPITLGQVFQRIDVVSRDFDNIVELELGAP 322          
BLAST of mRNA_Ecto-sp8_S_contig9248.30655.1 vs. uniprot
Match: A0A835AWW9_9POAL (PAP_fibrillin domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835AWW9_9POAL)

HSP 1 Score: 51.6 bits (122), Expect = 1.820e-5
Identity = 35/101 (34.65%), Postives = 52/101 (51.49%), Query Frame = 0
Query:    1 LQTVLSGVGEGYIPYSEADKSAIEELVVELETSSGQGTEVQFPRDLGKLDGRWRLVFTNNLVG----LGRLSPVELRDVYQVVDSAAGLVSNVVYATMSPP 97
            L + +SG+  G +  +E D S  +    ELE ++G G  V   RDL KL GRWRLV+++         GRL P+ L  V+Q +D  +    N+V   +  P
Sbjct:  244 LLSAVSGLNRG-LAATEEDLSRADAAARELEAAAG-GEPVDLERDLDKLQGRWRLVYSSAFSRPGPPTGRLLPITLGQVFQRIDVVSRDFDNIVELELGAP 342          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9248.30655.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FLU6_ECTSI7.400e-59100.00PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A836CAZ2_9STRA2.060e-2350.52PAP_fibrillin domain-containing protein n=1 Tax=Tr... [more]
A0A835ENR3_9POAL1.810e-535.35PAP_fibrillin domain-containing protein n=1 Tax=Di... [more]
A0A835AWW9_9POAL1.820e-534.65PAP_fibrillin domain-containing protein n=1 Tax=Di... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 1..91
e-value: 7.4E-10
score: 39.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9248contigEcto-sp8_S_contig9248:4903..5193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9248.30655.1mRNA_Ecto-sp8_S_contig9248.30655.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9248 4903..5193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9248.30655.1 ID=prot_Ecto-sp8_S_contig9248.30655.1|Name=mRNA_Ecto-sp8_S_contig9248.30655.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=97bp
LQTVLSGVGEGYIPYSEADKSAIEELVVELETSSGQGTEVQFPRDLGKLD
GRWRLVFTNNLVGLGRLSPVELRDVYQVVDSAAGLVSNVVYATMSPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom