prot_Ecto-sp8_S_contig92342.30628.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92342.30628.1
Unique Nameprot_Ecto-sp8_S_contig92342.30628.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length44
Homology
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: D7FL41_ECTSI (WD40 repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL41_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 4.360e-13
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0
Query:    1 IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD 33
            IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD
Sbjct:  202 IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD 234          
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: A0A075AZE2_ROZAC (WD repeat-containing protein wat1 n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AZE2_ROZAC)

HSP 1 Score: 62.4 bits (150), Expect = 2.490e-10
Identity = 27/44 (61.36%), Postives = 37/44 (84.09%), Query Frame = 0
Query:    1 IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 44
            I AHDTY+ KCVLSP+V+KL T+SAD T+K+W T ++ H++TLV
Sbjct:  179 IHAHDTYVTKCVLSPDVKKLATSSADGTIKIWATDSFLHEKTLV 222          
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: A0A7S3VMH4_DUNTE (Target of rapamycin complex subunit LST8 n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VMH4_DUNTE)

HSP 1 Score: 58.9 bits (141), Expect = 5.240e-9
Identity = 24/44 (54.55%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    1 IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 44
            ++AH TY+LKC++SP+ ++L TTSADKT+K+W+ +T+T  RTL+
Sbjct:  205 LRAHPTYILKCLISPDSQQLATTSADKTIKLWNLETFTLDRTLL 248          
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: A0A7S3H1Y8_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1Y8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.050e-9
Identity = 23/42 (54.76%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    2 KAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 43
            +AH+ YLLKCV+SP++  + TTSADKT+K+W+T +W  + TL
Sbjct:  204 QAHEDYLLKCVISPDLRSIATTSADKTIKLWETSSWNLETTL 245          
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: A0A836C989_9STRA (WD40 repeat-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C989_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.760e-8
Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    2 KAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTK-TWTHQRTL 43
            KAH+ YLLKCVLSPNV +LVTT +DKT KVW+    W  ++TL
Sbjct:  203 KAHEGYLLKCVLSPNVRQLVTTGSDKTAKVWNVGGNWPLEKTL 245          
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: A0A059LPD8_9CHLO (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LPD8_9CHLO)

HSP 1 Score: 55.5 bits (132), Expect = 9.660e-8
Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 43
            +KAH  ++LKC+LSP+V +L TTSADKTVK+W+   +T  RTL
Sbjct:  263 LKAHQGFVLKCLLSPDVRQLATTSADKTVKIWNLDGFTLDRTL 305          
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: E1ZL40_CHLVA (Target of rapamycin complex subunit LST8 n=3 Tax=Chlorella clade TaxID=2511126 RepID=E1ZL40_CHLVA)

HSP 1 Score: 53.9 bits (128), Expect = 3.260e-7
Identity = 24/43 (55.81%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 43
            ++AH  Y+LKC+LSP+V +L TTS+DKTVK+W+   +T  RTL
Sbjct:  206 LRAHQGYVLKCMLSPDVRQLATTSSDKTVKLWNLDGFTLDRTL 248          
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: A8JDD2_CHLRE (Target of rapamycin complex subunit LST8 n=9 Tax=Chlamydomonadales TaxID=3042 RepID=A8JDD2_CHLRE)

HSP 1 Score: 53.9 bits (128), Expect = 3.260e-7
Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0
Query:    1 IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV 44
            +KAH   +LKC++SP+ ++L TTSADKTVK+W+   +T  RTLV
Sbjct:  207 LKAHSNIILKCLISPDCQQLATTSADKTVKLWNLDGFTLDRTLV 250          
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: A0A4D9DF34_9STRA (Target of rapamycin complex subunit LST8 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DF34_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 4.570e-7
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTL 43
            +K H  +LLKC  SP+ ++LVTTSADKT K+W+ + W  + TL
Sbjct:  236 VKTHARFLLKCAFSPDSQRLVTTSADKTAKLWNVRKWEVEHTL 278          
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Match: A0A3P3YFU3_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YFU3_PLABS)

HSP 1 Score: 52.4 bits (124), Expect = 1.170e-6
Identity = 21/33 (63.64%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWD 33
            + AH+TYLLKC++SP+V  L TTSAD+TVK+W+
Sbjct:  224 VSAHNTYLLKCLISPDVRYLATTSADRTVKIWN 256          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92342.30628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL41_ECTSI4.360e-13100.00WD40 repeat containing protein n=1 Tax=Ectocarpus ... [more]
A0A075AZE2_ROZAC2.490e-1061.36WD repeat-containing protein wat1 n=1 Tax=Rozella ... [more]
A0A7S3VMH4_DUNTE5.240e-954.55Target of rapamycin complex subunit LST8 n=1 Tax=D... [more]
A0A7S3H1Y8_9STRA7.050e-954.76Target of rapamycin complex subunit LST8 n=1 Tax=S... [more]
A0A836C989_9STRA4.760e-862.79WD40 repeat-containing protein n=1 Tax=Tribonema m... [more]
A0A059LPD8_9CHLO9.660e-858.14Uncharacterized protein n=1 Tax=Helicosporidium sp... [more]
E1ZL40_CHLVA3.260e-755.81Target of rapamycin complex subunit LST8 n=3 Tax=C... [more]
A8JDD2_CHLRE3.260e-754.55Target of rapamycin complex subunit LST8 n=9 Tax=C... [more]
A0A4D9DF34_9STRA4.570e-751.16Target of rapamycin complex subunit LST8 n=3 Tax=M... [more]
A0A3P3YFU3_PLABS1.170e-663.64Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..44
e-value: 2.3E-9
score: 38.5
IPR037588Target of rapamycin complex subunit LST8PANTHERPTHR19842G BETA-LIKE PROTEIN GBLcoord: 1..43
NoneNo IPR availablePANTHERPTHR19842:SF0TARGET OF RAPAMYCIN COMPLEX SUBUNIT LST8coord: 1..43
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 20..34
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..42
score: 12.146
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..42
score: 11.445
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92342contigEcto-sp8_S_contig92342:47..178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92342.30628.1mRNA_Ecto-sp8_S_contig92342.30628.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92342 47..178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92342.30628.1 ID=prot_Ecto-sp8_S_contig92342.30628.1|Name=mRNA_Ecto-sp8_S_contig92342.30628.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=44bp
IKAHDTYLLKCVLSPNVEKLVTTSADKTVKVWDTKTWTHQRTLV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037588MLST8
IPR019775WD40_repeat_CS
IPR001680WD40_repeat
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf