prot_Ecto-sp8_S_contig92334.30626.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92334.30626.1
Unique Nameprot_Ecto-sp8_S_contig92334.30626.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length144
Homology
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BLAST of mRNA_Ecto-sp8_S_contig92334.30626.1 vs. uniprot
Match: UPI001593ECD9 (hypothetical protein n=1 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001593ECD9)

HSP 1 Score: 166 bits (420), Expect = 4.480e-50
Identity = 89/146 (60.96%), Postives = 107/146 (73.29%), Query Frame = 0 
Query:    1 MPFFTIA-LALAACTADETPAAQSSTDAPDSIASNNGAMDASRP-ADGSPTGQSQRISVRGFEWGDNCYLDYSLIASAADPDPVEETRSALCNVDACLPWFEEQAIPPELVGRTAIVTIGTGEQYDNAGNIMDDNFPLITSIRVDP 144
            MP  T A LALAAC A E PAA  ++D      S+ GAMDAS+P  D +  G +Q++ +RGFE GDNCYLDYSL A A D D   ETRSALC+VDAC+ WFEEQA+PP  +GR+A VT+G GEQYDN G +M D+FPLITSI+VDP
Sbjct:   17 MPLITAAILALAACGASEAPAAGPASD------SSEGAMDASKPDEDVTRAGAAQQVIIRGFECGDNCYLDYSLAAPAPDADTAGETRSALCSVDACIAWFEEQAMPPAFIGRSATVTLGLGEQYDNEGTVMSDDFPLITSIKVDP 156
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BLAST of mRNA_Ecto-sp8_S_contig92334.30626.1 vs. uniprot
Match: A0A6M4AR06_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas lacunae TaxID=2698828 RepID=A0A6M4AR06_9SPHN)

HSP 1 Score: 80.5 bits (197), Expect = 1.140e-16
Identity = 39/95 (41.05%), Postives = 51/95 (53.68%), Query Frame = 0 
Query:   48 PTGQS-QRISVRGFEWGDNCYLDYSLIASAADPDPVEETRSALCNVDACLPWFEEQAIPPELVGRTAIVTIGTGEQYDNAGNIMDDNFPLITSIR 141
            P G S   + + G   GDNCY+     A  A        +  +C   AC PWFEEQA+P ++VG+T  V +GT EQ DNAG + D  FP I  +R
Sbjct:   42 PAGDSWSAVKLTGLTCGDNCYVQIEPAAGGA-------AQEVMCTAQACNPWFEEQALPADIVGKTYEVRLGTAEQVDNAGIVQDAGFPAIVEMR 129
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BLAST of mRNA_Ecto-sp8_S_contig92334.30626.1 vs. uniprot
Match: A0A7G6SU30_9HYPH (Uncharacterized protein n=1 Tax=Mesorhizobium huakuii TaxID=28104 RepID=A0A7G6SU30_9HYPH)

HSP 1 Score: 53.1 bits (126), Expect = 2.670e-6
Identity = 26/77 (33.77%), Postives = 39/77 (50.65%), Query Frame = 0 
Query:   56 SVRGFEWGDNCYLDYSLIASAADPDPVEETRSALCNVDACLPWFEEQAIPPELVGRTAIVTIGTGEQYDNAGNIMDD 132
            ++R FE GDNCYL      +  D    E+    LC    C  W E  ++P    G+   VT+G G+Q ++AG +M +
Sbjct:   35 NIRSFECGDNCYL------TIVDTKKAEQV--GLCVAPECANWNERTSMPARYKGKRVTVTVGQGQQLNDAGEVMGE 103
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92334.30626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI001593ECD94.480e-5060.96hypothetical protein n=1 Tax=Parasphingorhabdus fl... [more]
A0A6M4AR06_9SPHN1.140e-1641.05Uncharacterized protein n=1 Tax=Sphingomonas lacun... [more]
A0A7G6SU30_9HYPH2.670e-633.77Uncharacterized protein n=1 Tax=Mesorhizobium huak... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..144
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.651

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92334contigEcto-sp8_S_contig92334:1..432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92334.30626.1mRNA_Ecto-sp8_S_contig92334.30626.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92334 1..432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92334.30626.1 ID=prot_Ecto-sp8_S_contig92334.30626.1|Name=mRNA_Ecto-sp8_S_contig92334.30626.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=144bp
MPFFTIALALAACTADETPAAQSSTDAPDSIASNNGAMDASRPADGSPTG
QSQRISVRGFEWGDNCYLDYSLIASAADPDPVEETRSALCNVDACLPWFE
EQAIPPELVGRTAIVTIGTGEQYDNAGNIMDDNFPLITSIRVDP
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