prot_Ecto-sp8_S_contig92330.30625.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92330.30625.1
Unique Nameprot_Ecto-sp8_S_contig92330.30625.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length43
Homology
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: D8LGH0_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGH0_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 7.080e-19
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    4 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV
Sbjct:   61 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 100          
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: A0A7C9DDW2_OPUST (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DDW2_OPUST)

HSP 1 Score: 77.0 bits (188), Expect = 5.660e-17
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    4 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            GYP+HFGQMEC+KLIASPGFP+KR+GYLGLMLLL E+ EV
Sbjct:   63 GYPTHFGQMECLKLIASPGFPEKRLGYLGLMLLLDERQEV 102          
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: A0A314KQ12_NICAT (Ap-1 complex subunit gamma-2 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A314KQ12_NICAT)

HSP 1 Score: 75.5 bits (184), Expect = 6.140e-17
Identity = 32/39 (82.05%), Postives = 37/39 (94.87%), Query Frame = 0
Query:    5 YPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            YP+HFGQMEC+KLIASPGFP+KR+GYLGLMLLL E+ EV
Sbjct:    8 YPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEV 46          
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: A0A0S3R267_PHAAN (Adaptin_N domain-containing protein n=1 Tax=Vigna angularis var. angularis TaxID=157739 RepID=A0A0S3R267_PHAAN)

HSP 1 Score: 75.9 bits (185), Expect = 3.470e-16
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    4 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            GYP++FGQMEC+KLIASPGFP+KR+GYLGLMLLL EK EV
Sbjct:   63 GYPTYFGQMECLKLIASPGFPEKRMGYLGLMLLLDEKQEV 102          
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: A0A2G2ZHT8_CAPAN (Adaptin_N domain-containing protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2ZHT8_CAPAN)

HSP 1 Score: 77.8 bits (190), Expect = 3.480e-16
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    4 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            GYP+HFGQMEC+KLIASPGFP+KR+GYLGLMLLL E+ EV
Sbjct:   77 GYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEV 116          
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: A0A2K3NL14_TRIPR (Ap-1 complex subunit gamma-2-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3NL14_TRIPR)

HSP 1 Score: 77.8 bits (190), Expect = 4.230e-16
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    4 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            GYP+HFGQMEC+KLIASPGFP+KR+GYLGLMLLL E+ EV
Sbjct:   51 GYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEV 90          
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: A0A371H0U8_MUCPR (AP-1 complex subunit gamma-2 (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371H0U8_MUCPR)

HSP 1 Score: 77.0 bits (188), Expect = 4.310e-16
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    4 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            GYP+HFGQMEC+KLIASPGFP+KR+GYLGLMLLL E+ EV
Sbjct:  134 GYPTHFGQMECLKLIASPGFPEKRMGYLGLMLLLDERQEV 173          
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: D8R5I2_SELML (AP-1 complex subunit gamma n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5I2_SELML)

HSP 1 Score: 79.0 bits (193), Expect = 4.930e-16
Identity = 34/40 (85.00%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    4 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            GYP+HFGQMEC+KLIASPGFP+KR+GYLGLMLLL EK EV
Sbjct:   51 GYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDEKQEV 90          
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: A0A1S4CAC7_TOBAC (AP-1 complex subunit gamma-2 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4CAC7_TOBAC)

HSP 1 Score: 77.8 bits (190), Expect = 5.200e-16
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    4 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            GYP+HFGQMEC+KLIASPGFP+KR+GYLGLMLLL E+ EV
Sbjct:   63 GYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEV 102          
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Match: A0A1S2Z8Y6_CICAR (AP-1 complex subunit gamma-2 n=2 Tax=IRL clade TaxID=2233839 RepID=A0A1S2Z8Y6_CICAR)

HSP 1 Score: 75.5 bits (184), Expect = 5.470e-16
Identity = 31/40 (77.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    4 GYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV 43
            GYP+HFGQMEC+KLI+SPGFP+KR+GYLGLMLL+ E+ EV
Sbjct:   63 GYPTHFGQMECLKLISSPGFPEKRIGYLGLMLLVDERQEV 102          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92330.30625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGH0_ECTSI7.080e-19100.00AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A7C9DDW2_OPUST5.660e-1782.50Adaptin_N domain-containing protein (Fragment) n=1... [more]
A0A314KQ12_NICAT6.140e-1782.05Ap-1 complex subunit gamma-2 n=1 Tax=Nicotiana att... [more]
A0A0S3R267_PHAAN3.470e-1682.50Adaptin_N domain-containing protein n=1 Tax=Vigna ... [more]
A0A2G2ZHT8_CAPAN3.480e-1682.50Adaptin_N domain-containing protein n=1 Tax=Capsic... [more]
A0A2K3NL14_TRIPR4.230e-1682.50Ap-1 complex subunit gamma-2-like protein n=1 Tax=... [more]
A0A371H0U8_MUCPR4.310e-1682.50AP-1 complex subunit gamma-2 (Fragment) n=1 Tax=Mu... [more]
D8R5I2_SELML4.930e-1685.00AP-1 complex subunit gamma n=6 Tax=Selaginella moe... [more]
A0A1S4CAC7_TOBAC5.200e-1682.50AP-1 complex subunit gamma-2 n=1 Tax=Nicotiana tab... [more]
A0A1S2Z8Y6_CICAR5.470e-1677.50AP-1 complex subunit gamma-2 n=2 Tax=IRL clade Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..43
e-value: 2.9E-14
score: 54.3
NoneNo IPR availablePANTHERPTHR22780:SF32coord: 4..43
NoneNo IPR availablePANTHERPTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONcoord: 4..43
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92330contigEcto-sp8_S_contig92330:472..600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92330.30625.1mRNA_Ecto-sp8_S_contig92330.30625.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92330 472..609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92330.30625.1 ID=prot_Ecto-sp8_S_contig92330.30625.1|Name=mRNA_Ecto-sp8_S_contig92330.30625.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=43bp
MRAGYPSHFGQMECIKLIASPGFPDKRVGYLGLMLLLQEKDEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold