prot_Ecto-sp8_S_contig92229.30610.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig92229.30610.1
Unique Nameprot_Ecto-sp8_S_contig92229.30610.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length94
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92229.30610.1 vs. uniprot
Match: D7FUZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ9_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 2.840e-12
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:   62 MDVLRDAEKTEKSTGVGSPTFRRLSAVKQVVEH 94
            MDVLRDAEKTEKSTGVGSPTFRRLSAVKQVVEH
Sbjct:    1 MDVLRDAEKTEKSTGVGSPTFRRLSAVKQVVEH 33
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92229.30610.1 vs. uniprot
Match: D7FZQ8_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ8_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 3.220e-11
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:   62 MDVLRDAEKTEKSTGVGSPTFRRLSAVKQVVEH 94
            MDVLRDAEKTEKSTGVGSPTFRRLSAVKQVVEH
Sbjct:    1 MDVLRDAEKTEKSTGVGSPTFRRLSAVKQVVEH 33
[Close]
BLAST of mRNA_Ecto-sp8_S_contig92229.30610.1 vs. uniprot
Match: A0A6H5KEJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ6_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 6.160e-10
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0 
Query:   62 MDVLRDAEKTEKSTGVGSPTFRRLSAVKQVVEH 94
            MDVLRDAEKT KSTGVGSPTFR+LSAVKQVVEH
Sbjct:    1 MDVLRDAEKTGKSTGVGSPTFRQLSAVKQVVEH 33
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig92229.30610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUZ9_ECTSI2.840e-12100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZQ8_ECTSI3.220e-11100.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KEJ6_9PHAE6.160e-1093.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig92229contigEcto-sp8_S_contig92229:2..283 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig92229.30610.1mRNA_Ecto-sp8_S_contig92229.30610.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig92229 2..283 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig92229.30610.1 ID=prot_Ecto-sp8_S_contig92229.30610.1|Name=mRNA_Ecto-sp8_S_contig92229.30610.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=94bp
PRADLPCYTTAGSLGAAPSLDLARVVWPDGSTANAGDRGVAVYQATPIVT
TLSPVPGGKNFMDVLRDAEKTEKSTGVGSPTFRRLSAVKQVVEH
back to top