prot_Ecto-sp8_S_contig9219.30605.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9219.30605.1
Unique Nameprot_Ecto-sp8_S_contig9219.30605.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length687
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9219.30605.1 vs. uniprot
Match: A0A6H5JK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK27_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 9.030e-45
Identity = 118/320 (36.88%), Postives = 169/320 (52.81%), Query Frame = 0 
Query:  320 MLITQFD-SSPATYSAEDAGVRLHVRLGSMAEEQVAGPIVIETDKRLLVECGGSWFLVAAVVDCQPSGSIFDVP-----LDLEFRVEEGLDELXXXXXXXXXXXXXXXECKEIIRKTYK--VLRREQSGEPWNSLSDEETTVVEENGVFFMRAQFKHFTEGCLAKNLLLDNAVQTEVVRLGRPRKKQLEFINATNKTLTFLVLPTTWSNKDIKSLALSVGVAEIGEAKASIEWLIEQAVLTEAVAPQVLQIPPMNRQGTPKAGERCTSDYCDLPNSGGSEARVALVTVENETVSVWFSRNVRERTRLMVLPGQFSAGMNP 631
            +L+ QFD ++  TY   DAGVRL VR   + E +VAGPI + TDKR +VE G   FL++ ++DCQPSG+IF  P     LD  F  E   DE                E   I+R TYK  V  R + G+PW    D      ++   +F+R + +HF++ CL   L L ++  + VV  GR +K+QLEF+NAT+K + F VLPT +S    KS+   V V  I      ++   E  +++ A AP    +P   + GTPKAG+ C +   ++P     EARV + T + +    W +    ERT+L+VLP  FS G  P
Sbjct:  780 ILVDQFDWTTDETYFDADAGVRLVVRPDCLKEGEVAGPISVVTDKRHIVERGDGLFLLSTMIDCQPSGTIFQDPQNPLVLDFVFGEE---DEDSQGTDDTDEDTEDGKEDLAILRATYKARVFWRMEEGQPWELHEDGAWDFDDQLKKYFLRVKIRHFSDVCLGTELSLHSSCDSCVVSRGRTKKRQLEFVNATDKKIVFKVLPTGYSTSATKSINAGVEVPGIVGVTVGLDRESETVIMSAATAPSTFSVPFKKKAGTPKAGDVCPAHTYNIPKKMRGEARVYMYTSDRQ--EPWLNEVHPERTQLVVLPPMFSGGPTP 1094
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9219.30605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JK27_9PHAE9.030e-4536.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9219contigEcto-sp8_S_contig9219:2479..5589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9219.30605.1mRNA_Ecto-sp8_S_contig9219.30605.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9219 2376..6575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9219.30605.1 ID=prot_Ecto-sp8_S_contig9219.30605.1|Name=mRNA_Ecto-sp8_S_contig9219.30605.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=687bp
MDMETPPPTPLRKAPAPLLAPYMPSLTSASGAAAAASPSPETGPAPSRVG
GGRRNYAVRAGAVWLSSATSYKDGVAGGGISTRKQKVATCPREKGRFVRW
ASVFLPISYFKPPEEAVEATEAAEEGPQKAIEAAQGHHLGGGGQGGLAGE
QHHVSQAGALTADSVHPDIGWGGSGSMRGGVGGVGGIGDGGGTGGGGPLG
MMHFDGVDSSVCGDGAEFNAVDDSRSSSRWEHRNQHQRQPQQQQQPQSRQ
QQGKRQRQQQQQQLRRQAQLMEERESAADDGVSSWHSGSVDDPDSMTVRG
GGTVRIDDVEHYTLESTRTMLITQFDSSPATYSAEDAGVRLHVRLGSMAE
EQVAGPIVIETDKRLLVECGGSWFLVAAVVDCQPSGSIFDVPLDLEFRVE
EGLDELSDDSSEDANLDEYVDECKEIIRKTYKVLRREQSGEPWNSLSDEE
TTVVEENGVFFMRAQFKHFTEGCLAKNLLLDNAVQTEVVRLGRPRKKQLE
FINATNKTLTFLVLPTTWSNKDIKSLALSVGVAEIGEAKASIEWLIEQAV
LTEAVAPQVLQIPPMNRQGTPKAGERCTSDYCDLPNSGGSEARVALVTVE
NETVSVWFSRNVRERTRLMVLPGQFSAGMNPQLGKHPLPQDSRCIVRNTF
TATGGEPMSIVNAPVSTVSSTGSGSTSAEEMDEGGE*
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